ggKbase home page

PLM3-1_170_b1_sep16_scaffold_9736

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_9736_1

Not on your lists

comp(1..1494)
DNA (1494bp) protein (498aa)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_48_C08.;"
DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DNA topoisomerase VI subunit B (EC:5.99.1.3)
PLM3-1_170_b1_sep16_scaffold_9736_2

Not on your lists


comp(1484..2053)
DNA (570bp) protein (190aa)
RNA-processing protein Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B8Z6_9ARCH
RNA-processing protein
RNA-processing protein {ECO:0000313|EMBL:KFM19640.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-P11.;"
PLM3-1_170_b1_sep16_scaffold_9736_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(2050..2829)
DNA (780bp) protein (260aa)
non-specific serine/threonine protein kinase (EC:2.7.11.1); K07178 RIO kinase 1 [EC:2.7.11.1] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
non-specific serine/threonine protein kinase (EC:2.7.11.1)
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_9736_4

Not on your lists

comp(2873..3184)
DNA (312bp) protein (104aa)
Translation initiation factor 1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RVP5_CENSY
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-O18.;"
translation initiation factor 1
PLM3-1_170_b1_sep16_scaffold_9736_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(3224..3520)
DNA (297bp) protein (99aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_9736_6
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(3520..3942)
DNA (423bp) protein (141aa)
Translation initiation factor IF2/IF5 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A3P6_NITMS
translation initiation factor IF2/IF5
Translation initiation factor IF2/IF5 {ECO:0000313|EMBL:ABX13308.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
PLM3-1_170_b1_sep16_scaffold_9736_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

4416..4679
DNA (264bp) protein (88aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
Displaying 7 items

View Taxonomy