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PLM3-1_170_b1_sep16_scaffold_7979

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_7979_1
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(37..615)
DNA (579bp) protein (193aa)
50S ribosomal protein L24P Tax=Thaumarchaeota archaeon N4 RepID=V6ASP6_9ARCH
50S ribosomal protein L24P {ECO:0000313|EMBL:CDI05565.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
KOW domain-containing protein
PLM3-1_170_b1_sep16_scaffold_7979_2
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(617..1051)
DNA (435bp) protein (145aa)
50S ribosomal protein L14P Tax=Thaumarchaeota archaeon N4 RepID=V6ASK4_9ARCH
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
50S ribosomal protein L14
PLM3-1_170_b1_sep16_scaffold_7979_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1051..1374)
DNA (324bp) protein (108aa)
30S ribosomal protein S17 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
30S ribosomal protein S17
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_7979_4
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1371..1637)
DNA (267bp) protein (89aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|HAMAP-Rule:MF_00754}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
Ribonuclease P protein component 1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KIX9_9ARCH
ribonuclease P
PLM3-1_170_b1_sep16_scaffold_7979_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1634..1837)
DNA (204bp) protein (68aa)
ribosomal protein L29; K02904 large subunit ribosomal protein L29 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
50S ribosomal protein L29
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_7979_6

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comp(1837..2646)
DNA (810bp) protein (270aa)
30S ribosomal protein S3 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Uncharacterized protein {ECO:0000313|EMBL:KKL89611.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S3
PLM3-1_170_b1_sep16_scaffold_7979_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2649..3107)
DNA (459bp) protein (153aa)
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
rpl22p; 50S ribosomal protein L22P
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_7979_8
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3112..3507)
DNA (396bp) protein (132aa)
30S ribosomal protein S19P Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BCE1_9ARCH
rps; 30S ribosomal protein S19
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
PLM3-1_170_b1_sep16_scaffold_7979_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3547..3813)
DNA (267bp) protein (89aa)
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
50S ribosomal protein L25
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_7979_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3810..4622)
DNA (813bp) protein (271aa)
rpl4lp; 50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
rpl4lp; 50S ribosomal protein L4P
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_7979_11

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comp(4619..5224)
DNA (606bp) protein (202aa)
50S ribosomal protein L3P Tax=Thaumarchaeota archaeon N4 RepID=V6ASN7_9ARCH
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_76_D06.;"
rpl3p; 50S ribosomal protein L3P
Displaying 11 items

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