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PLM3-1_170_b1_sep16_scaffold_3383

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_3383_1

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3..149
DNA (147bp) protein (49aa)
Tubulin/FtsZ GTPase (FtsZ) {ECO:0000313|EMBL:AIF12591.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_56_D04.;"
tubulin/FtsZ GTPase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
tubulin/FtsZ GTPase
PLM3-1_170_b1_sep16_scaffold_3383_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(152..676)
DNA (525bp) protein (175aa)
50S ribosomal protein L31e bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
50S ribosomal protein L31e
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_3383_3
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

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comp(677..835)
DNA (159bp) protein (53aa)
50S ribosomal protein L39e Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1I1_NITMS
50S ribosomal protein L39e
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC RSA3.;"
PLM3-1_170_b1_sep16_scaffold_3383_4
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(883..1443)
DNA (561bp) protein (187aa)
NUDIX hydrolase Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KKJ2_9ARCH
NUDIX hydrolase {ECO:0000313|EMBL:EGG42112.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
NUDIX hydrolase
PLM3-1_170_b1_sep16_scaffold_3383_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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1519..2196
DNA (678bp) protein (226aa)
5 10-methylenetetrahydrofolate reductase-like protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
methylenetetrahydrofolate reductase (NAD(P)H) domain protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_3383_6

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comp(2237..3250)
DNA (1014bp) protein (338aa)
Methionine synthase (B12-independent) (MetE) {ECO:0000313|EMBL:AIF22712.1}; EC=2.1.1.14 {ECO:0000313|EMBL:AIF22712.1};; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_10_F12.;"
methionine synthase (B12-independent) (EC:2.1.1.14)
hypothetical protein Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI0003661661
PLM3-1_170_b1_sep16_scaffold_3383_7

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comp(3243..4169)
DNA (927bp) protein (309aa)
Putative uncharacterized protein Tax=uncultured marine crenarchaeote HF4000_ANIW97M7 RepID=B3T3B8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM64843.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_3383_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4685..5071)
DNA (387bp) protein (129aa)
ABC uptake transporter, substrate-binding protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ABC uptake transporter, substrate-binding protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_3383_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(5097..5672)
DNA (576bp) protein (192aa)
ABC uptake transporter, substrate-binding protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ABC uptake transporter, substrate-binding protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_3383_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(5672..6451)
DNA (780bp) protein (260aa)
ABC uptake transporter permease bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ABC uptake transporter permease
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_3383_11
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6480..7241)
DNA (762bp) protein (254aa)
ABC transporter related protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CZ36_9ARCH
ABC transporter related protein {ECO:0000313|EMBL:EGP94194.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
ABC transporter
PLM3-1_170_b1_sep16_scaffold_3383_12

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7496..8683
DNA (1188bp) protein (396aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_167_H09.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1K3_NITMS
PLM3-1_170_b1_sep16_scaffold_3383_13
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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8693..8857
DNA (165bp) protein (55aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BAI1_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS83223.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
PLM3-1_170_b1_sep16_scaffold_3383_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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8858..9712
DNA (855bp) protein (285aa)
lysine biosynthesis protein LysX bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Lysine biosynthesis protein LysX
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_3383_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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9742..10794
DNA (1053bp) protein (351aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38) bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_3383_16
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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10798..11598
DNA (801bp) protein (267aa)
argB; Acetylglutamate/acetylaminoadipate kinase (EC:2.7.2.- 2.7.2.8)
acetylglutamate kinase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_3383_17
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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11595..12773
DNA (1179bp) protein (393aa)
acetylornithine and succinylornithine aminotransferase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
argD; transaminase, acetylornithine/succinylornithine family
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_3383_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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12763..13182
DNA (420bp) protein (140aa)
AsnC family transcriptional regulator bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
putative HTH-type transcriptional regulator LysM
Tax=CSP1_1_Thaumarchaeota
Displaying 18 items

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