ggKbase home page

PLM3-1_170_b1_sep16_scaffold_18487

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_18487_1

Not on your lists

2..259
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL52334.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
single-stranded nucleic acid binding R3H domain-containing protein
PLM3-1_170_b1_sep16_scaffold_18487_2
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

260..889
DNA (630bp) protein (210aa)
tmk; thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=KTHY_SYNJB
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_18487_3
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(994..1179)
DNA (186bp) protein (62aa)
Putative uncharacterized protein Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EKL6_CHLPB
hypothetical protein
Tax=GWC2_Nitrospirae_56_14_curated
PLM3-1_170_b1_sep16_scaffold_18487_4
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists


1362..1730
DNA (369bp) protein (123aa)
30S ribosomal protein S20 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSY9_ACIC1
30S ribosomal protein S20
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_18487_5

Not on your lists

2477..3004
DNA (528bp) protein (176aa)
Cysteine desulfurase, SufS subfamily (EC:2.8.1.7)
Marine sediment metagenome DNA, contig: S01H1_S17121 {ECO:0000313|EMBL:GAG23320.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
PLM3-1_170_b1_sep16_scaffold_18487_6
unknown

Not on your lists

3064..3531
DNA (468bp) protein (156aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_18487_7

Not on your lists

3560..3904
DNA (345bp) protein (115aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYR0_ROSS1
Marine sediment metagenome DNA, contig: S01H1_S28798 {ECO:0000313|EMBL:GAG40671.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_18487_8
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(4072..5499)
DNA (1428bp) protein (476aa)
cell envelope-related transcriptional attenuator bin=RBG_16_Aminicenantes_66_30 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
putative transcriptional regulator
Tax=RBG_16_Chloroflexi_64_32_curated
Displaying 8 items

View Taxonomy