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PLM3-1_170_b1_sep16_scaffold_19392

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_19392_1

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2..1096
DNA (1095bp) protein (365aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM58317.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA topoisomerase bin=GWB2_Nitrospirae_rel_47_37 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
DNA topoisomerase I
PLM3-1_170_b1_sep16_scaffold_19392_2

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1047..1940
DNA (894bp) protein (298aa)
Tyrosine recombinase XerC Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z8J2_DEHE1
Uncharacterized protein {ECO:0000313|EMBL:KKM58318.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
tyrosine recombinase XerC
PLM3-1_170_b1_sep16_scaffold_19392_3
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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1953..3611
DNA (1659bp) protein (553aa)
Xaa-pro dipeptidase, putative Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TEH0_HELMI
aminopeptidase
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_19392_4

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3699..4262
DNA (564bp) protein (188aa)
Elongation factor P Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCQ1_THET1
Uncharacterized protein {ECO:0000313|EMBL:KKL51581.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
translation elongation factor P
PLM3-1_170_b1_sep16_scaffold_19392_5
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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4338..5531
DNA (1194bp) protein (398aa)
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NN30_ROSCS
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_19392_6
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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5563..5670
DNA (108bp) protein (36aa)
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_19392_7
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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5683..6402
DNA (720bp) protein (240aa)
PHP domain-containing protein; K07053 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
phosphotransferase
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_19392_8
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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6399..7226
DNA (828bp) protein (276aa)
Phosphoribosylglycinamide transformylase, putative Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z8J6_DEHE1
phosphoribosylglycinamide transformylase
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_19392_9
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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7276..7590
DNA (315bp) protein (105aa)
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_19392_10
unknown

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comp(8031..8294)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_19392_11
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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8326..9279
DNA (954bp) protein (318aa)
det:DET0838 purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
phosphoribosylamine/glycine ligase (EC:6.3.4.13)
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_19392_12

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9374..9832
DNA (459bp) protein (153aa)
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase Tax=Dehalobacter sp. UNSWDHB RepID=T0I9K4_9FIRM
Marine sediment metagenome DNA, contig: S01H1_S21565 {ECO:0000313|EMBL:GAG14753.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_19392_13
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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9854..10177
DNA (324bp) protein (108aa)
Cupin 2, conserved barrel domain protein Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ALZ2_PELPD
cupin
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_19392_14
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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10603..12153
DNA (1551bp) protein (517aa)
VCBS repeat-containing protein Tax=Singulisphaera acidiphila RepID=L0DI63_SINAD
VCBS repeat-containing protein
Tax=RBG_16_Chloroflexi_64_32_curated
Displaying 14 items

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