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PLM3-1_170_b1_sep16_scaffold_1440

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1440_1

Not on your lists

2..1006
DNA (1005bp) protein (335aa)
Trehalose synthase Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MXW3_CORCM
Uncharacterized protein {ECO:0000313|EMBL:KKM63078.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
treT; Trehalose synthase
PLM3-1_170_b1_sep16_scaffold_1440_2
CSP1_5_NC10, NC10, Bacteria

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comp(1026..3059)
DNA (2034bp) protein (678aa)
delta-1-pyrroline-5-carboxylate dehydrogenase/L-proline dehydrogenase (EC:1.5.1.12 1.5.99.8); K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12] bin=bin3_NC10 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin3_NC10 organism_group=NC10
delta-1-pyrroline-5-carboxylate dehydrogenase, L-proline dehydrogenase (EC:1.5.1.12 1.5.99.8)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1440_3
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(3056..3955)
DNA (900bp) protein (300aa)
Aldehyde Dehydrogenase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZUG1_OPITP
aldehyde dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACB74004.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM3-1_170_b1_sep16_scaffold_1440_4
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(4079..7216)
DNA (3138bp) protein (1046aa)
Acriflavin resistance protein bin=GWC2_Chloroflexi_73_18 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
acriflavin resistance protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_170_b1_sep16_scaffold_1440_5
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(7251..7745)
DNA (495bp) protein (165aa)
Acriflavin resistance protein bin=GWC2_Chloroflexi_73_18 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_170_b1_sep16_scaffold_1440_6
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(7742..9772)
DNA (2031bp) protein (677aa)
Acriflavin resistance protein bin=GWC2_Chloroflexi_73_18 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
acriflavin resistance protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_170_b1_sep16_scaffold_1440_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9736..10848)
DNA (1113bp) protein (371aa)
Acriflavin resistance protein bin=GWC2_Chloroflexi_73_18 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
acriflavin resistance protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_170_b1_sep16_scaffold_1440_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11208..12107
DNA (900bp) protein (300aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G757_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ27625.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM3-1_170_b1_sep16_scaffold_1440_9
CSP1_5_NC10, NC10, Bacteria

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12680..13714
DNA (1035bp) protein (345aa)
hypothetical protein bin=bin3_NC10 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1440_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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13846..14721
DNA (876bp) protein (292aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G760_GEOUR
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_1440_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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14810..16453
DNA (1644bp) protein (548aa)
Peptidoglycan-binding domain 1 protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G761_GEOUR
peptidoglycan binding domain-containing protein
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ABQ27629.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM3-1_170_b1_sep16_scaffold_1440_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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16450..17133
DNA (684bp) protein (228aa)
ABC transporter related protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G762_GEOUR
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ABQ27630.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM3-1_170_b1_sep16_scaffold_1440_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

17130..18431
DNA (1302bp) protein (434aa)
ABC transporter Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4LC39_9GAMM
ABC transporter-like protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_1440_14
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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18522..19367
DNA (846bp) protein (282aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=GWB2_Chloroflexi_54_36_curated
PLM3-1_170_b1_sep16_scaffold_1440_15

Not on your lists

19474..20292
DNA (819bp) protein (273aa)
Short chain dehydrogenase Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TR63_METAC
Uncharacterized protein {ECO:0000313|EMBL:KKK74280.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
short chain dehydrogenase
PLM3-1_170_b1_sep16_scaffold_1440_16
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(20535..21263)
DNA (729bp) protein (243aa)
histidinol-phosphatase (PHP family) (EC:3.1.3.15)
Histidinol-phosphatase (PHP family) {ECO:0000313|EMBL:AEV85269.1}; EC=3.1.3.15 {ECO:0000313|EMBL:AEV85269.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
Histidinol-phosphatase (PHP family) Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SBS9_ACTS5
PLM3-1_170_b1_sep16_scaffold_1440_17

Not on your lists

comp(21502..22317)
DNA (816bp) protein (272aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CXI1_9BACT
Marine sediment metagenome DNA, contig: S03H2_S11387 {ECO:0000313|EMBL:GAH63697.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_1440_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(22256..22762)
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CXI1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20979.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_1440_19
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(22900..23670)
DNA (771bp) protein (257aa)
dev:DhcVS_1009 dnaN; DNA polymerase III, beta subunit; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
dnaN; DNA polymerase III subunit beta
Tax=RBG_16_Chloroflexi_64_32_curated
Displaying 19 items

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