ggKbase home page

PLM3-1_170_b1_sep16_scaffold_6351

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_6351_1
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..694
DNA (693bp) protein (231aa)
serine/threonine protein kinase bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_43_22_curated
PLM3-1_170_b1_sep16_scaffold_6351_2
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

688..1836
DNA (1149bp) protein (383aa)
serine/threonine protein kinase bin=bin9_gal15 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_6351_3
unknown

Not on your lists

1821..2507
DNA (687bp) protein (229aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_6351_4
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

2513..3574
DNA (1062bp) protein (354aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003709540
holA; DNA polymerase III subunit delta
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_6351_5
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3541..4482)
DNA (942bp) protein (314aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003811DAF
oppD2; oligopeptide transport ATP-binding protein OppD
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_170_b1_sep16_scaffold_6351_6

Not on your lists

comp(4628..5266)
DNA (639bp) protein (213aa)
LexA repressor Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K236_DEHLB
Uncharacterized protein {ECO:0000313|EMBL:KKL44442.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LexA family transcriptional regulator
PLM3-1_170_b1_sep16_scaffold_6351_7
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

5434..6138
DNA (705bp) protein (235aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DSR6_9BACT
LmbE family protein
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_6351_8

Not on your lists

6138..6911
DNA (774bp) protein (258aa)
Fumarylacetoacetate (FAA) hydrolase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NL2_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:KKK93542.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
fumarylacetoacetate (FAA) hydrolase
PLM3-1_170_b1_sep16_scaffold_6351_9

Not on your lists

comp(6963..7214)
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK93541.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_6351_10
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7404..7637)
DNA (234bp) protein (78aa)
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_170_b1_sep16_scaffold_6351_11

Not on your lists

8057..8740
DNA (684bp) protein (228aa)
Putative peptide ABC transporter permease protein Tax=uncultured marine bacterium MedDCM-OCT-S11-C95 RepID=D6PE71_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKL76453.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dppB3; PepT family ABC transporter permease
Displaying 11 items

View Taxonomy