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PLM3-1_170_b1_sep16_scaffold_22442

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_22442_1
unknown

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86..331
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_22442_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(370..909)
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XNZ7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58463.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_22442_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(1045..1530)
DNA (486bp) protein (162aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9PAI5_9DELT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM3-1_170_b1_sep16_scaffold_22442_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(1527..2360)
DNA (834bp) protein (278aa)
hypothetical protein Tax=Deinococcus apachensis RepID=UPI00035E87F5
DNA polymerase beta domain protein region {ECO:0000313|EMBL:EFH82516.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_22442_5

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comp(3073..3954)
DNA (882bp) protein (294aa)
coenzyme A transferase; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] bin=bin5_DeltaP species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=bin5_DeltaP organism_group=Deltaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KKL94161.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit
PLM3-1_170_b1_sep16_scaffold_22442_6

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comp(3939..4634)
DNA (696bp) protein (232aa)
Putative uncharacterized protein Tax=Maricaulis maris (strain MCS10) RepID=Q0AS74_MARMM
Uncharacterized protein {ECO:0000313|EMBL:KKM63902.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_22442_7
unknown

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comp(4766..4981)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_22442_8

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comp(4978..5775)
DNA (798bp) protein (266aa)
phenazine biosynthesis protein Tax=Arenimonas oryziterrae RepID=UPI0003B43CEC
Marine sediment metagenome DNA, contig: S01H1_C01639 {ECO:0000313|EMBL:GAF74440.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phenazine biosynthesis, PhzF family protein
PLM3-1_170_b1_sep16_scaffold_22442_9

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comp(5800..6924)
DNA (1125bp) protein (375aa)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K2CMD6_9BACT
Marine sediment metagenome DNA, contig: S01H4_S09043 {ECO:0000313|EMBL:GAH01448.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
protein of unknown function UPF0157
PLM3-1_170_b1_sep16_scaffold_22442_10
R_OP11_Woesebacteria_39_13, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(7000..7647)
DNA (648bp) protein (216aa)
Putative membrane protein Tax=Blastopirellula marina DSM 3645 RepID=A3ZZL4_9PLAN
protein-S-isoprenylcysteine methyltransferase-like
Tax=RIFCSPHIGHO2_02_FULL_OP11_Woesebacteria_39_13_curated
PLM3-1_170_b1_sep16_scaffold_22442_11

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comp(7836..8447)
DNA (612bp) protein (204aa)
prepilin peptidase (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Uncharacterized protein {ECO:0000313|EMBL:KKL94159.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
peptidase
PLM3-1_170_b1_sep16_scaffold_22442_12
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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8691..8873
DNA (183bp) protein (61aa)
Flp/Fap pilin component
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_170_b1_sep16_scaffold_22442_13
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

9093..9275
DNA (183bp) protein (61aa)
Flp/Fap pilin component
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_170_b1_sep16_scaffold_22442_14
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

9502..9684
DNA (183bp) protein (61aa)
Flp/Fap pilin component Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RCD6_AMMDK
Flp/Fap pilin component
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_170_b1_sep16_scaffold_22442_15

Not on your lists

9842..9991
DNA (150bp) protein (50aa)
TadE family protein Tax=Bacillus bataviensis LMG 21833 RepID=K6D3D9_9BACI
Uncharacterized protein {ECO:0000313|EMBL:KKK78916.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 15 items

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