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PLM3-1_170_b1_sep16_scaffold_13033

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_13033_1

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comp(3..677)
DNA (675bp) protein (225aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHE4_THEYD
Uncharacterized protein {ECO:0000313|EMBL:KKL49384.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_13033_2

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comp(709..1686)
DNA (978bp) protein (326aa)
Putative NarL family two-component response regulator Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4F4_CALAS
Uncharacterized protein {ECO:0000313|EMBL:KKK62574.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative NarL family two-component response regulator
PLM3-1_170_b1_sep16_scaffold_13033_3
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1774..2187)
DNA (414bp) protein (138aa)
HxlR family transcriptional regulator Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U437_MYXSD
HxlR family transcriptional regulator
HxlR family transcriptional regulator {ECO:0000313|EMBL:AGC42625.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM3-1_170_b1_sep16_scaffold_13033_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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2686..3045
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0V5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH82445.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_13033_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3109..3921
DNA (813bp) protein (271aa)
Pirin-like protein Tax=Clostridium ultunense Esp RepID=M1ZAY7_9CLOT
Pirin-like protein {ECO:0000313|EMBL:CCQ94893.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
pirin
PLM3-1_170_b1_sep16_scaffold_13033_6

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comp(3995..4495)
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL71946.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_13033_7
unknown

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comp(4482..4670)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_13033_8
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4801..5595)
DNA (795bp) protein (265aa)
Metalloid methyltransferase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q094F4_STIAD
methyltransferase
Metalloid methyltransferase {ECO:0000313|EMBL:EAU67130.1}; Methyltransferase {ECO:0000313|EMBL:ADO68161.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM3-1_170_b1_sep16_scaffold_13033_9
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5592..6038)
DNA (447bp) protein (149aa)
PilT protein domain protein Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJB5_SYNLT
PilT protein domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:ADI01004.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
PLM3-1_170_b1_sep16_scaffold_13033_10
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(6039..6278)
DNA (240bp) protein (80aa)
Transcriptional regulator, AbrB family Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RLV1_MOOTA
AbrB family transcriptional regulator
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ABC18588.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
PLM3-1_170_b1_sep16_scaffold_13033_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6422..7594)
DNA (1173bp) protein (391aa)
Esterase Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2R7B9_STRVP
Uncharacterized protein {ECO:0000313|EMBL:ETX08517.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
esterase
PLM3-1_170_b1_sep16_scaffold_13033_12
Pseudomonas sp. 21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7687..8001)
DNA (315bp) protein (105aa)
hypothetical protein Tax=Pseudomonas nitroreducens RepID=UPI0002F368A2
UPF0145 protein UB43_19265 {ECO:0000256|HAMAP-Rule:MF_00338}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 21.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_13033_13
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(8148..8603)
DNA (456bp) protein (152aa)
det:DET0825 putative alpha-isopropylmalate/homocitrate synthase family transferase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
2-isopropylmalate synthase (EC:2.3.1.182)
Tax=RBG_16_Chloroflexi_50_9_curated
PLM3-1_170_b1_sep16_scaffold_13033_14
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(8767..9567)
DNA (801bp) protein (267aa)
IPM/Hcit synthase-like protein (EC:2.3.3.-)
IPM/Hcit synthase-like protein Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LVY6_THEPS
Tax=RBG_16_Chloroflexi_68_14_curated
Displaying 14 items

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