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PLM3-1_170_b1_sep16_scaffold_13222

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_13222_1
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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257..1042
DNA (786bp) protein (262aa)
greA; transcription elongation factor; K03624 transcription elongation factor GreA bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
transcription elongation factor GreA
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_13222_2
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(1175..1816)
DNA (642bp) protein (214aa)
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_13222_3

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2125..2961
DNA (837bp) protein (279aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-); K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Uncharacterized protein {ECO:0000313|EMBL:KKL05752.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cytochrome oxidase assembly
PLM3-1_170_b1_sep16_scaffold_13222_4

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2963..3871
DNA (909bp) protein (303aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-)
Uncharacterized protein {ECO:0000313|EMBL:KKL11058.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM3-1_170_b1_sep16_scaffold_13222_5
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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3957..4778
DNA (822bp) protein (274aa)
cytochrome c oxidase subunit II (EC:1.9.3.1)
Cytochrome c oxidase subunit 2 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C449_SPHTD
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_13222_6

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4783..6009
DNA (1227bp) protein (409aa)
ctaD; cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
cytochrome c oxidase subunit I (EC:1.9.3.1)
Uncharacterized protein {ECO:0000313|EMBL:KKL74037.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 6 items

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