ggKbase home page

PLM3-1_170_b1_sep16_scaffold_25131

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_25131_1
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..210)
DNA (210bp) protein (70aa)
Gamma-glutamylisopropylamide synthetase Tax=Arthrobacter aurescens (strain TC1) RepID=A1RCI1_ARTAT
ipuC; gamma-glutamylisopropylamide synthetase
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_25131_2
Yersinia ruckeri, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

528..1064
DNA (537bp) protein (179aa)
Methyl transferase Tax=Yersinia ruckeri ATCC 29473 RepID=C4ULG2_YERRU
SAM-dependent methyltransferase {ECO:0000313|EMBL:AKA37507.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia ruckeri.;"
mycolic acid cyclopropane synthetase family protein
PLM3-1_170_b1_sep16_scaffold_25131_trna_1
unknown

Not on your lists

comp(1094..1180)
DNA (87bp)
transferRNA Ser
PLM3-1_170_b1_sep16_scaffold_25131_3
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

1303..2427
DNA (1125bp) protein (375aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2AI15_9BACT
PT repeat-containing protein
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_25131_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(2434..2772)
DNA (339bp) protein (113aa)
Polysaccharide deacetylase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMA8_9CHLR
Polysaccharide deacetylase {ECO:0000313|EMBL:EFH86908.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
PLM3-1_170_b1_sep16_scaffold_25131_5
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(2738..3139)
DNA (402bp) protein (134aa)
Polysaccharide deacetylase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGZ5_THET1
polysaccharide deacetylase
Tax=RBG_16_Chloroflexi_57_9_curated
PLM3-1_170_b1_sep16_scaffold_25131_6

Not on your lists

3492..3800
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK84667.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_25131_7
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3797..4534
DNA (738bp) protein (246aa)
Putative hydrolase Tax=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) RepID=B1VPL5_STRGG
hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAG23765.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350).;"
PLM3-1_170_b1_sep16_scaffold_25131_8
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4543..5397)
DNA (855bp) protein (285aa)
hypothetical protein Tax=Mastigocladopsis repens RepID=UPI0003063BAC
Methyltransferase type 12 {ECO:0000313|EMBL:KIJ84957.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
type 12 methyltransferase
PLM3-1_170_b1_sep16_scaffold_25131_9
unknown

Not on your lists

5527..6084
DNA (558bp) protein (186aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_25131_10
unknown

Not on your lists

6346..6606
DNA (261bp) protein (87aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_25131_11

Not on your lists

6603..7565
DNA (963bp) protein (321aa)
succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta Tax=Caldithrix abyssi DSM 13497 RepID=H1XSA8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKL12620.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 12 items

View Taxonomy