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PLM1_60_b1_redo_sep16_scaffold_98

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_98_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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163..1113
DNA (951bp) protein (317aa)
Radical SAM domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBR9_NITGG
Fe-S oxidoreductase
Fe-S oxidoreductase {ECO:0000313|EMBL:AIF83822.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_98_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1486..2757)
DNA (1272bp) protein (424aa)
serS; serine--tRNA ligase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Serine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBS2_NITGG
PLM1_60_b1_redo_sep16_scaffold_98_3

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comp(2750..3004)
DNA (255bp) protein (85aa)
Putative uncharacterized protein Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5C2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF03901.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_16_C11.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_98_4
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3001..4434)
DNA (1434bp) protein (478aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIC1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14652.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_98_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4443..4889)
DNA (447bp) protein (149aa)
30S ribosomal protein S15 Tax=Candidatus Nitrososphaera gargensis RepID=K0IN41_NITGG
rps15p; 30S ribosomal protein S15p/S13e
R-protein S15p {ECO:0000313|EMBL:ADK26011.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM1_60_b1_redo_sep16_scaffold_98_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4992..5363
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG03_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58715.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_98_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5599..5877
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBS5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58716.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_98_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5991..6317)
DNA (327bp) protein (109aa)
Protein translation factor SUI1 homolog Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ96_NITGG
protein translation factor SUI1
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_98_9
unknown

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6587..6865
DNA (279bp) protein (93aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_98_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6904..7110
DNA (207bp) protein (69aa)
Preprotein translocase subunit SecG Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMW2_NITGG
secB; protein translocase subunit SecB
Preprotein translocase subunit SecG {ECO:0000256|HAMAP-Rule:MF_00751}; Protein transport protein Sec61 subunit beta homolog {ECO:0000256|HAMAP-Rule:MF_00751}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_98_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7134..8876
DNA (1743bp) protein (581aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEX4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58320.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_98_12
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(8907..9413)
DNA (507bp) protein (169aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
N5-carboxyaminoimidazole ribonucleotide mutase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKC0_IGNAJ
purE; 5-(carboxyamino)imidazole ribonucleotide mutase
PLM1_60_b1_redo_sep16_scaffold_98_13
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9400..10584)
DNA (1185bp) protein (395aa)
5-(carboxyamino)imidazole ribonucleotide synthase (EC:6.3.4.18)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Phosphoribosylaminoimidazole carboxylase ATPase subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFR4_NITGG
PLM1_60_b1_redo_sep16_scaffold_98_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10666..11421
DNA (756bp) protein (252aa)
fabG1; 3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AFU57346.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AFU57346.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7V2_NITGG
PLM1_60_b1_redo_sep16_scaffold_98_15

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comp(11454..11897)
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKL6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24876.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_98_16
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12006..12263)
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFD6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84050.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_98_17
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12477..13913)
DNA (1437bp) protein (479aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Amidophosphoribosyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHU9_NITGG
PLM1_60_b1_redo_sep16_scaffold_98_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(13971..16142)
DNA (2172bp) protein (724aa)
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Phosphoribosylformylglycinamidine synthase 2 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJS1_NITGG
PLM1_60_b1_redo_sep16_scaffold_98_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16158..16850)
DNA (693bp) protein (231aa)
purQ; phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Phosphoribosylformylglycinamidine synthase 1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IB05_NITGG
PLM1_60_b1_redo_sep16_scaffold_98_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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17023..17412
DNA (390bp) protein (130aa)
Putative signal transduction protein with CBS domains Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFD1_NITGG
putative signal-transduction protein containing cAMP-binding and CBS domains
Putative signal-transduction protein containing cAMP-binding and CBS domains {ECO:0000313|EMBL:AIF84054.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_98_21
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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17479..18657
DNA (1179bp) protein (393aa)
Putative quinoprotein glucose/ sorbosone dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJY2_NITGG
putative quinoprotein glucose/sorbosone dehydrogenase
Putative quinoprotein glucose/ sorbosone dehydrogenase {ECO:0000313|EMBL:AIC14760.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_98_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(18738..20552)
DNA (1815bp) protein (605aa)
Putative PilT protein domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGT4_NITGG
PilT protein domain-containing protein
Putative PilT protein domain protein {ECO:0000313|EMBL:AFU59050.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_98_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(20644..22434)
DNA (1791bp) protein (597aa)
sdr3; glucose/ribitol dehydrogenase family protein (EC:1.1.1.-)
Glucose/ribitol dehydrogenase family protein {ECO:0000313|EMBL:AFU58651.1}; EC=1.1.1.- {ECO:0000313|EMBL:AFU58651.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Glucose/ribitol dehydrogenase family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBJ6_NITGG
PLM1_60_b1_redo_sep16_scaffold_98_24
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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22541..22867
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BD80_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS83027.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
PLM1_60_b1_redo_sep16_scaffold_98_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(23007..23558)
DNA (552bp) protein (184aa)
endA1; tRNA-splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease {ECO:0000313|EMBL:AFU58703.1}; EC=3.1.27.9 {ECO:0000313|EMBL:AFU58703.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
tRNA-splicing endonuclease Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIB9_NITGG
PLM1_60_b1_redo_sep16_scaffold_98_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(23558..24211)
DNA (654bp) protein (218aa)
Putative phosphate transport regulator Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN39_NITGG
phosphate transport regulator
Putative phosphate transport regulator {ECO:0000313|EMBL:AFU58704.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_98_27
unknown

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comp(24346..24534)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_98_28
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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24828..25814
DNA (987bp) protein (329aa)
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000313|EMBL:AIC14723.1}; EC=1.1.1.3 {ECO:0000313|EMBL:AIC14723.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Homoserine dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II55_NITGG
PLM1_60_b1_redo_sep16_scaffold_98_29
unknown

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26194..26562
DNA (369bp) protein (123aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_98_30
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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26816..28162
DNA (1347bp) protein (449aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ATQ2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06022.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
Displaying items 1-30 of 67 in total

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