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PLM1_60_b1_redo_sep16_scaffold_191

Search features with annotation key words

Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_191_30
unknown

Not on your lists

comp(25045..25299)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_191_31
unknown

Not on your lists

comp(25284..25562)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_191_32
unknown

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comp(25700..25948)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_191_33
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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26509..27918
DNA (1410bp) protein (470aa)
Permeases of the major facilitator superfamily Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KMC0_9ARCH
arabinose efflux permease family protein
Arabinose efflux permease family protein {ECO:0000313|EMBL:AIF83025.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_191_34
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(27943..28398)
DNA (456bp) protein (152aa)
Putative cyclase/dehydrase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL22_NITGG
cyclase/dehydrase
Putative cyclase/dehydrase {ECO:0000313|EMBL:AFU59272.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_191_35
unknown

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comp(28473..28604)
DNA (132bp) protein (44aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_191_36
unknown

Not on your lists

28752..28922
DNA (171bp) protein (57aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_191_37
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(29071..29952)
DNA (882bp) protein (294aa)
Conserved uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FL84_STIAD
F5/8 type C domain protein {ECO:0000313|EMBL:KFE67957.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_191_38
unknown

Not on your lists

29975..30118
DNA (144bp) protein (48aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_191_39
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

30154..31515
DNA (1362bp) protein (454aa)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};; tRNA(Ile2) agmatidine synthetase {ECO:0000256|HAMAP-Rule:MF_01892}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP49_NITGG
putative DNA-binding protein containing a Zn-ribbon domain
PLM1_60_b1_redo_sep16_scaffold_191_40
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(32164..32709)
DNA (546bp) protein (182aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_00077}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
tRNA (cytidine(56)-2'-O)-methyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILG8_NITGG
tRNA ribose 2'-O-methyltransferase
PLM1_60_b1_redo_sep16_scaffold_191_41
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(32709..33800)
DNA (1092bp) protein (364aa)
GTPase HflX Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMM2_NITGG
GTP-binding protein
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_191_42
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(33793..34203)
DNA (411bp) protein (137aa)
Putative MBF1 (Multiprotein Bridging factor) Tax=Candidatus Nitrososphaera gargensis RepID=K0IG80_NITGG
MBF1 (multiprotein Bridging factor)
Putative MBF1 (Multiprotein Bridging factor) {ECO:0000313|EMBL:AFU60406.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_191_43
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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34435..34914
DNA (480bp) protein (160aa)
Putative PUA domain profile Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP29_NITGG
putative PUA domain protein
Putative PUA domain protein {ECO:0000313|EMBL:AIC16084.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_191_44
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

34911..35246
DNA (336bp) protein (112aa)
Nascent polypeptide-associated complex protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILG6_NITGG
nascent polypeptide-associated complex protein
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_191_45
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

35324..35662
DNA (339bp) protein (113aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMM0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16082.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_191_46
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

35730..36359
DNA (630bp) protein (210aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG74_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16081.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_191_47
unknown

Not on your lists

36550..36798
DNA (249bp) protein (83aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_191_48
unknown

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37007..37204
DNA (198bp) protein (66aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_191_49
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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38240..38713
DNA (474bp) protein (158aa)
pyridoxamine 5'-phosphate oxidase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
putative flavin-nucleotide-binding protein
Tax=CSP1_1_Thaumarchaeota
PLM1_60_b1_redo_sep16_scaffold_191_50
unknown

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39117..40193
DNA (1077bp) protein (359aa)
Uncharacterized protein Tax=Bacteroides sp. CAG:1076 RepID=R5MJA7_9BACE
PLM1_60_b1_redo_sep16_scaffold_191_51
unknown

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41435..41569
DNA (135bp) protein (45aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_191_52
R_OP11_Curtissbacteria_41_44, Curtissbacteria, Microgenomates, Bacteria

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comp(41839..42948)
DNA (1110bp) protein (370aa)
Uncharacterized protein Tax=Methanobacterium formicicum DSM 3637 RepID=K2R0X6_METFO
Tax=RIFCSPHIGHO2_01_FULL_OP11_Curtissbacteria_41_44_curated
PLM1_60_b1_redo_sep16_scaffold_191_53
unknown

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43046..43333
DNA (288bp) protein (96aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_191_54
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

43792..44910
DNA (1119bp) protein (373aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB47302.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. Kolksee.;"
putative NHL repeat containing protein bin=bin1_lowGC species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
PLM1_60_b1_redo_sep16_scaffold_191_55
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(45002..46291)
DNA (1290bp) protein (430aa)
Putative quinoprotein glucose/ sorbosone dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILJ9_NITGG
quinoprotein glucose/sorbosone dehydrogenase
Putative quinoprotein glucose/ sorbosone dehydrogenase {ECO:0000313|EMBL:AFU60468.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_191_56
unknown

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46746..47084
DNA (339bp) protein (113aa)

This feature has no annotations

Displaying items 31-57 of 57 in total

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