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PLM1_60_b1_redo_sep16_scaffold_216

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_216_1
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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655..1182
DNA (528bp) protein (176aa)
Transcriptional regulator, MarR family protein Tax=Blastopirellula marina DSM 3645 RepID=A3ZTD6_9PLAN
putative Transcriptional regulator, MarR family protein
Putative Transcriptional regulator, MarR family protein {ECO:0000313|EMBL:AJM92236.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.;"
PLM1_60_b1_redo_sep16_scaffold_216_2
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1190..2797
DNA (1608bp) protein (536aa)
Transporter, major facilitator family protein Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E8K6_9ARCH
major facilitator superfamily transporter
Major facilitator superfamily transporter {ECO:0000313|EMBL:AIC17000.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_216_3
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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3248..3970
DNA (723bp) protein (241aa)
hypothetical protein Tax=Promicromonospora sukumoe RepID=UPI00035D4A43
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
PLM1_60_b1_redo_sep16_scaffold_216_4
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4234..5529)
DNA (1296bp) protein (432aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16068.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_216_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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7950..8375
DNA (426bp) protein (142aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCP5_9CHLR
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EFH88159.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
PLM1_60_b1_redo_sep16_scaffold_216_6
R_Proteobacteria_53_8, Proteobacteria, Bacteria

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8449..8817
DNA (369bp) protein (123aa)
PF04343 family protein Tax=Actinomyces massiliensis F0489 RepID=J1HB43_9ACTO
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
PLM1_60_b1_redo_sep16_scaffold_216_7
unknown

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comp(8972..9397)
DNA (426bp) protein (142aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_216_8
unknown

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9533..10315
DNA (783bp) protein (261aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_216_9
unknown

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comp(10327..10890)
DNA (564bp) protein (188aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_216_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11262..12371)
DNA (1110bp) protein (370aa)
Oxidoreductase, 2Fe-2S and FAD/NAD(P) binding domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II37_NITGG
Oxidoreductase, 2Fe-2S and FAD/NAD(P) binding domain protein {ECO:0000313|EMBL:AFU57642.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
oxidoreductase, 2Fe-2S and FAD/NAD(P) binding domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_216_11
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13066..13869
DNA (804bp) protein (268aa)
Putative metallophosphoesterase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILD3_NITGG
putative metallophosphoesterase
Putative metallophosphoesterase {ECO:0000313|EMBL:AIC17126.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_216_12

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14351..15763
DNA (1413bp) protein (471aa)
Serine protease Tax=uncultured organism RepID=D7GN83_9ZZZZ
Serine protease {ECO:0000313|EMBL:CBM43229.1}; Flags: Precursor;; species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
peptidase S8 and S53 subtilisin kexin sedolisin
PLM1_60_b1_redo_sep16_scaffold_216_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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16088..16888
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II31_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58598.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_216_14
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

17452..17742
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AUS4_9ARCH
Deoxyribonuclease/rho motif-related TRAM domain containing protein
Deoxyribonuclease/rho motif-related TRAM domain containing protein {ECO:0000313|EMBL:AIC14554.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_216_15
unknown

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17928..18173
DNA (246bp) protein (82aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_216_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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18630..19859
DNA (1230bp) protein (410aa)
Monovalent cation/proton antiporter-2 family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I732_NITGG
monovalent cation/proton antiporter-2 family protein
Monovalent cation/proton antiporter-2 family protein {ECO:0000313|EMBL:AFU57076.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_216_17
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(19899..20291)
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM79_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16197.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_216_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(20740..21228)
DNA (489bp) protein (163aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INA7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59044.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_216_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(21326..22042)
DNA (717bp) protein (239aa)
Uncharacterized protein Tax=Rhizobium sp. CF080 RepID=J2J4F5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ETW98875.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
CalU12 protein
PLM1_60_b1_redo_sep16_scaffold_216_20
unknown

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comp(22039..22200)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_216_21
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(22336..23229)
DNA (894bp) protein (298aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ72_NITGG
putative metal-binding integral membrane protein
Putative metal-binding integral membrane protein {ECO:0000313|EMBL:AIF85527.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_216_22
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(23296..23916)
DNA (621bp) protein (207aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZA6_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83077.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_216_23
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

24412..24843
DNA (432bp) protein (144aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15661.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_216_24
unknown

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25017..25223
DNA (207bp) protein (69aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_216_25
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(25471..25851)
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Neptuniibacter caesariensis RepID=Q2BLD3_NEPCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82145.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_216_26
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

26049..26354
DNA (306bp) protein (102aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF85286.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_216_27
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

26518..26796
DNA (279bp) protein (93aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14353.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_216_28
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

27027..27488
DNA (462bp) protein (154aa)
Putative universal stress protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH54_NITGG
universal stress protein UspA-like protein
Universal stress protein UspA-like protein {ECO:0000313|EMBL:AIF82957.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_216_29
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

27716..28678
DNA (963bp) protein (321aa)
Putative F420-dependent oxidoreductase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U509_9CHLR
Putative F420-dependent oxidoreductase {ECO:0000313|EMBL:EFH81589.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
luciferase-like monooxygenase
PLM1_60_b1_redo_sep16_scaffold_216_30
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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28828..29403
DNA (576bp) protein (192aa)
Conserved protein bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=RBG_13_Nitrospirae_43_8_curated
Displaying items 1-30 of 49 in total

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