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PLM1_60_b1_redo_sep16_scaffold_1748

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1748_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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52..582
DNA (531bp) protein (177aa)
Putative carboxymethylenebutenolidase (Dienelactone hydrolase)(DLH) Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ESB1_BRASB
SnoaL-like domain
SnoaL-like domain {ECO:0000313|EMBL:AIF83670.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_1748_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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748..1407
DNA (660bp) protein (220aa)
Uncharacterized protein Tax=Microvirga sp. WSM3557 RepID=I4Z1H3_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82830.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_1748_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1779..2792)
DNA (1014bp) protein (338aa)
O-methyltransferase, family 2 Tax=alpha proteobacterium BAL199 RepID=A8U1B9_9PROT
O-methyltransferase, family 2
O-methyltransferase, family 2 {ECO:0000313|EMBL:AIC16633.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_1748_4
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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comp(3089..3556)
DNA (468bp) protein (156aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000371DBFF
PPOX class probable F420-dependent enzyme, MSMEG_5819 family
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM1_60_b1_redo_sep16_scaffold_1748_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3761..4171
DNA (411bp) protein (137aa)
Putative glyoxalase/bleomycin resistance protein/dioxygenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK90_NITGG
glyoxalase/bleomycin resistance protein/dioxygenase
Putative glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AFU58722.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1748_6
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4783..5328)
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INZ6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82509.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_1748_7
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5568..5912
DNA (345bp) protein (115aa)
hypothetical protein Tax=filamentous cyanobacterium ESFC-1 RepID=UPI000371B5AE
Uncharacterized protein {ECO:0000313|EMBL:EWM54083.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1748_8
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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6141..6488
DNA (348bp) protein (116aa)
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
PLM1_60_b1_redo_sep16_scaffold_1748_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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6665..7090
DNA (426bp) protein (142aa)
putative F420-dependent protein bin=bin1_lowGC species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin1_lowGC organism_group=Unknown_CP
putative F420-dependent protein
Tax=CSP1_2_Dadabacteria
PLM1_60_b1_redo_sep16_scaffold_1748_10
unknown

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7650..8528
DNA (879bp) protein (293aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1748_11
unknown

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8605..8814
DNA (210bp) protein (70aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1748_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8935..9480)
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL38_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59307.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1748_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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10220..11026
DNA (807bp) protein (269aa)
type 11 methyltransferase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Methyltransferase type 11
Tax=CSP1_1_Thaumarchaeota
PLM1_60_b1_redo_sep16_scaffold_1748_14
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(11220..11666)
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PC53_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_60_b1_redo_sep16_scaffold_1748_15
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11798..12025
DNA (228bp) protein (76aa)
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKF9_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84174.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_1748_16

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12083..12265
DNA (183bp) protein (61aa)
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKF9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24819.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1748_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12483..12836
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IND5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59184.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1748_18
unknown

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12892..13080
DNA (189bp) protein (63aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1748_19
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13828..14622)
DNA (795bp) protein (265aa)
Uncharacterized protein Tax=Rhizobium sp. (strain NGR234) RepID=C3MGP9_RHISN
Uncharacterized protein {ECO:0000313|EMBL:KEC81429.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
thioredoxin-like protein
PLM1_60_b1_redo_sep16_scaffold_1748_20
unknown

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comp(14622..14879)
DNA (258bp) protein (86aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1748_21
RBG_13_Lokiarchaeota_45_8_curated, Lokiarchaeota, Archaea

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15374..16000
DNA (627bp) protein (209aa)
dihydrofolate reductase Tax=Dyadobacter beijingensis RepID=UPI00035D6A1F
dihydrofolate reductase
Tax=RBG_13_Lokiarchaeota_45_8_curated
Displaying 21 items

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