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PLM1_60_b1_redo_sep16_scaffold_5415

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_5415_1
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(128..955)
DNA (828bp) protein (276aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00037FB483
Uncharacterized protein {ECO:0000313|EMBL:EXG79591.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Putative secreted protein
PLM1_60_b1_redo_sep16_scaffold_5415_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(952..1602)
DNA (651bp) protein (217aa)
Uncharacterized protein {ECO:0000313|EMBL:EXG79592.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_60_b1_redo_sep16_scaffold_5415_3
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1892..2335
DNA (444bp) protein (148aa)
Ferric-uptake regulator Tax=Nocardioides sp. CF8 RepID=R7XX51_9ACTO
Fur family transcriptional regulator {ECO:0000313|EMBL:KEI43656.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
Fur family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_5415_4
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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2332..3837
DNA (1506bp) protein (502aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
Catalase Tax=Dietzia cinnamea P4 RepID=E6JDU9_9ACTO
catalase
PLM1_60_b1_redo_sep16_scaffold_5415_5
Streptomyces sp. PAMC26508, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3913..4650
DNA (738bp) protein (246aa)
SAM-dependent methyltransferase Tax=Streptomyces RepID=UPI0003666526
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGJ56794.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PAMC26508.;"
PLM1_60_b1_redo_sep16_scaffold_5415_6
unknown

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4732..5340
DNA (609bp) protein (203aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_5415_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5322..5660)
DNA (339bp) protein (113aa)
Cytidine deaminase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYR9_PSEUX
cytidine deaminase
Cytidine deaminase {ECO:0000313|EMBL:AEA26639.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_5415_8
unknown

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comp(5657..5821)
DNA (165bp) protein (55aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_5415_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5814..7127)
DNA (1314bp) protein (438aa)
Uncharacterized protein Tax=Micromonospora RepID=E8RZV3_MICSL
CBS domain-containing protein {ECO:0000313|EMBL:EXG80439.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_5415_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7130..7597)
DNA (468bp) protein (156aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
heat-shock protein Tax=Micromonospora sp. CNB394 RepID=UPI0003635A31
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_5415_11
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7602..8294)
DNA (693bp) protein (231aa)
phosphate starvation protein PhoH Tax=Frankia sp. BCU110501 RepID=UPI00036B4E9A
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:ABW11548.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
Displaying 11 items

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