ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_5424

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_5424_1
Streptomyces griseoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..542)
DNA (540bp) protein (180aa)
hypothetical protein Tax=Streptomyces prunicolor RepID=UPI00036F27F7
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EFL40033.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
putative oxyacyl-(acyl carrier protein) reductase
PLM1_60_b1_redo_sep16_scaffold_5424_2
Streptomyces sp. JS01, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(809..1060)
DNA (252bp) protein (84aa)
Duplicated ATPase component CbrU of energizing module of predicted cobalamin ECF transporter Tax=Streptomyces globisporus RepID=UPI00029B4C4F
Cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFK85956.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. JS01.;"
Duplicated ATPase component CbrU of energizing module of predicted cobalamin ECF transporter
PLM1_60_b1_redo_sep16_scaffold_5424_3
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1057..1377)
DNA (321bp) protein (107aa)
hypothetical protein Tax=Streptomyces sp. AA0539 RepID=UPI00031806F6
Cobalt transport protein {ECO:0000313|EMBL:AKG46291.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
cobalt ABC transporter permease
PLM1_60_b1_redo_sep16_scaffold_5424_4
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1412..1852)
DNA (441bp) protein (147aa)
hypothetical protein Tax=Gordonia kroppenstedtii RepID=UPI000379C526
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63281.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM1_60_b1_redo_sep16_scaffold_5424_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1925..2803)
DNA (879bp) protein (293aa)
putative oxidoreductase (EC:1.1.1.-)
hypothetical protein Tax=Nocardioides sp. Iso805N RepID=UPI0003685622
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:EXG81072.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_60_b1_redo_sep16_scaffold_5424_6
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2976..5663
DNA (2688bp) protein (896aa)
LuxR family transcriptional regulator Tax=Frankia sp. Iso899 RepID=UPI0003B71821
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AJF69423.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM1_60_b1_redo_sep16_scaffold_5424_7
unknown

Not on your lists

5840..5992
DNA (153bp) protein (51aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B518CD
PLM1_60_b1_redo_sep16_scaffold_5424_8
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6138..7055
DNA (918bp) protein (306aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000372162B
Alpha/beta hydrolase {ECO:0000313|EMBL:KIF75320.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
alpha/beta hydrolase
PLM1_60_b1_redo_sep16_scaffold_5424_9
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7321..7707
DNA (387bp) protein (129aa)
hypothetical protein Tax=Streptomyces prunicolor RepID=UPI00037A6BF4
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AJF63275.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM1_60_b1_redo_sep16_scaffold_5424_10
Streptomyces sp. SNA15896, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7704..8276
DNA (573bp) protein (191aa)
Putative ABC transporter Tax=Streptomyces sp. SNA15896 RepID=D2KTX3_9ACTO
Putative ABC transporter {ECO:0000313|EMBL:BAI63276.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. SNA15896.;"
ABC transporter ATP-binding protein
Displaying 10 items

View Taxonomy