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PLM1_60_b1_redo_sep16_scaffold_5552

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_5552_1
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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370..819
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZU8_9ACTO
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66193.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_5552_2
unknown

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comp(1170..1352)
DNA (183bp) protein (61aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_5552_3
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2417..3601
DNA (1185bp) protein (395aa)
Cytochrome P450 Tax=Amycolatopsis mediterranei RepID=D8I7G1_AMYMU
cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:AEK44225.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_60_b1_redo_sep16_scaffold_5552_4
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3774..4214)
DNA (441bp) protein (147aa)
Integrase core domain protein Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P2D8_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:KGN39872.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
integrase catalytic subunit
PLM1_60_b1_redo_sep16_scaffold_5552_5
unknown

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4357..4659
DNA (303bp) protein (101aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_5552_6
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4656..6431)
DNA (1776bp) protein (592aa)
Transposase-like protein Tax=Frankia sp. (strain EAN1pec) RepID=A8L3B7_FRASN
Uncharacterized protein {ECO:0000313|EMBL:EWM14546.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
transposase
PLM1_60_b1_redo_sep16_scaffold_5552_7
unknown

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comp(6611..7183)
DNA (573bp) protein (191aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_5552_8
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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8329..8721
DNA (393bp) protein (131aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
RNA-directed DNA polymerase {ECO:0000313|EMBL:AEH09117.1}; EC=2.7.7.49 {ECO:0000313|EMBL:AEH09117.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
RNA-directed DNA polymerase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B4R4_FRADG
PLM1_60_b1_redo_sep16_scaffold_5552_9
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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8931..9797
DNA (867bp) protein (289aa)
Luciferase-like, subgroup Tax=Actinoplanes sp. N902-109 RepID=R4LAL7_9ACTO
Luciferase-like, subgroup
Luciferase-like, subgroup {ECO:0000313|EMBL:AGL16522.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_5552_10
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9764..10342)
DNA (579bp) protein (193aa)
XRE family transcriptional regulator Tax=Sciscionella marina RepID=UPI0003678719
XRE family transcriptional regulator
Putative MmyB family DNA-binding protein {ECO:0000313|EMBL:GAJ81460.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
PLM1_60_b1_redo_sep16_scaffold_5552_11
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10511..11497)
DNA (987bp) protein (329aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
RNA-directed DNA polymerase Tax=Streptomyces ipomoeae 91-03 RepID=L1L6T3_9ACTO
RNA-directed DNA polymerase {ECO:0000313|EMBL:EKX68318.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
PLM1_60_b1_redo_sep16_scaffold_5552_12
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

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12591..13664
DNA (1074bp) protein (358aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003636035
hypothetical protein
Tax=RBG_16_Chloroflexi_54_11_curated
PLM1_60_b1_redo_sep16_scaffold_5552_13
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(14146..14358)
DNA (213bp) protein (71aa)
integrase Tax=Serinicoccus marinus RepID=UPI0003B46E2E
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EWM64139.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
Phage integrase family protein
PLM1_60_b1_redo_sep16_scaffold_5552_14
unknown

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comp(14404..14532)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 14 items

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