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PLM1_60_b1_redo_sep16_scaffold_3086

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_3086_1
unknown

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1..222
DNA (222bp) protein (74aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_3086_2

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289..1314
DNA (1026bp) protein (342aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase Tax=Frankia sp. Iso899 RepID=UPI0003B48238
Putative uncharacterized protein {ECO:0000313|EMBL:ADU56095.1}; species="unclassified sequences; environmental samples.;" source="uncultured organism CA878.;"
PLM1_60_b1_redo_sep16_scaffold_3086_3
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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1546..1743
DNA (198bp) protein (66aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003736623
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KHD74863.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
bfd; BFD (2Fe-2S)-binding domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_3086_4
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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1831..2310
DNA (480bp) protein (160aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
bacterioferritin Tax=Longispora albida RepID=UPI00036D29C2
bfrA; Bacterioferritin
PLM1_60_b1_redo_sep16_scaffold_3086_5
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(2483..3508)
DNA (1026bp) protein (342aa)
threonine aldolase (EC:4.1.2.5)
Threonine aldolase Tax=Micromonospora sp. ATCC 39149 RepID=C4RLL1_9ACTO
Threonine aldolase {ECO:0000313|EMBL:EEP70920.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
PLM1_60_b1_redo_sep16_scaffold_3086_6
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(3519..4844)
DNA (1326bp) protein (442aa)
aroF; 3-deoxy-7-phosphoheptulonate synthase (Phospho-2-dehydro-3-deoxyheptonate aldolase) (DAHP synthetase class II) (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase (Phospho-2-dehydro-3-deoxyheptonate aldolase) (DAHP synthetase class II) {ECO:0000313|EMBL:CCG03051.1}; EC=2.5.1.54 {ECO:0000313|EMBL:CCG03051.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
3-deoxy-7-phosphoheptulonate synthase (Phospho-2-dehydro-3-deoxyheptonate aldolase) (DAHP synthetase class II) Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RSU8_BLASD
PLM1_60_b1_redo_sep16_scaffold_3086_7
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4912..5307)
DNA (396bp) protein (132aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI00034BF784
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB46480.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_3086_8
Gordonia namibiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5324..6151)
DNA (828bp) protein (276aa)
Putative oxidoreductase Tax=Gordonia namibiensis NBRC 108229 RepID=K6WGT7_9ACTO
Putative oxidoreductase {ECO:0000313|EMBL:GAB98525.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia namibiensis NBRC 108229.;"
short-chain dehydrogenase/reductase SDR
PLM1_60_b1_redo_sep16_scaffold_3086_9
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(6148..6963)
DNA (816bp) protein (272aa)
Alpha/beta hydrolase fold protein Tax=Micromonospora sp. (strain L5) RepID=E8S4L3_MICSL
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ADL48054.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_3086_10
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(6960..8333)
DNA (1374bp) protein (458aa)
Flavin-containing monooxygenase FMO Tax=Micromonospora lupini str. Lupac 08 RepID=I0L912_9ACTO
Flavin-containing monooxygenase FMO {ECO:0000313|EMBL:CCH20309.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
fad-dependent pyridine nucleotide-disulfide oxidoreductase
PLM1_60_b1_redo_sep16_scaffold_3086_11
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8330..8995)
DNA (666bp) protein (222aa)
TetR family transcriptional regulator Tax=Mycobacterium sp. (strain JDM601) RepID=F5YY14_MYCSD
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AEF34214.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM601).;"
PLM1_60_b1_redo_sep16_scaffold_3086_12
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(9154..10179)
DNA (1026bp) protein (342aa)
phosphofructokinase (EC:2.7.1.90)
Phosphofructokinase {ECO:0000313|EMBL:ADD44687.1}; EC=2.7.1.90 {ECO:0000313|EMBL:ADD44687.1};; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
6-phosphofructokinase Tax=Longispora albida RepID=UPI0003662F57
PLM1_60_b1_redo_sep16_scaffold_3086_13
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(10309..10815)
DNA (507bp) protein (169aa)
3'-5' exoribonuclease {ECO:0000256|HAMAP-Rule:MF_00977}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00977};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SAB1_GEOOG
hypothetical protein
Displaying 13 items

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