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PLM1_60_b1_redo_sep16_scaffold_3171

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_3171_1
unknown

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comp(2..94)
DNA (93bp) protein (31aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_3171_2
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(239..607)
DNA (369bp) protein (123aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00035DA86B
Uncharacterized protein {ECO:0000313|EMBL:KKC06413.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
PLM1_60_b1_redo_sep16_scaffold_3171_3
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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766..1179
DNA (414bp) protein (138aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00035DA86B
Uncharacterized protein {ECO:0000313|EMBL:KKC06412.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
PLM1_60_b1_redo_sep16_scaffold_3171_4
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1341..4508)
DNA (3168bp) protein (1056aa)
Type I site-specific deoxyribonuclease, HsdR family Tax=Saccharomonospora marina XMU15 RepID=H5X6Z8_9PSEU
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EHR53466.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
HsdR family type I site-specific deoxyribonuclease
PLM1_60_b1_redo_sep16_scaffold_3171_5
Corynebacterium diphtheriae, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4508..5710)
DNA (1203bp) protein (401aa)
Type I restriction enzyme, S subunit Tax=Corynebacterium diphtheriae (strain PW8) RepID=H2HY65_CORDW
type I restriction enzyme, S subunit
Restriction endonuclease subunit S {ECO:0000313|EMBL:KKA81852.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium diphtheriae.;"
PLM1_60_b1_redo_sep16_scaffold_3171_6
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5703..7325)
DNA (1623bp) protein (541aa)
hsdM; Putative type I restriction/modification system DNA methylase HsdM (M protein) (DNA methyltransferase) (EC:2.1.1.-)
Type I restriction/modification system DNA methylase hsdM Tax=Mycobacterium avium RepID=T2GVW1_MYCAV
Type I restriction/modification system DNA methylase hsdM {ECO:0000313|EMBL:BAN32131.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. hominissuis TH135.;"
PLM1_60_b1_redo_sep16_scaffold_3171_7
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7327..9204)
DNA (1878bp) protein (626aa)
Uncharacterized protein Tax=Saccharomonospora marina XMU15 RepID=H5X701_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR53469.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_3171_8
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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9377..10801
DNA (1425bp) protein (475aa)
Fis family transcriptional regulator Tax=Actinokineospora enzanensis RepID=UPI000382EF24
Transcriptional regulator {ECO:0000313|EMBL:EFL09510.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
Fis family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_3171_9
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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10894..11355
DNA (462bp) protein (154aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI0003661A7E
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABP55507.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
Displaying 9 items

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