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PLM1_60_b1_redo_sep16_scaffold_3462

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_3462_1
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..503)
DNA (501bp) protein (167aa)
SAM-dependent methyltransferase Tax=Streptomyces sp. R1-NS-10 RepID=UPI00036A6352
SAM-dependent methyltransferase {ECO:0000313|EMBL:KJR06403.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
type 11 methyltransferase
PLM1_60_b1_redo_sep16_scaffold_3462_2
Mycobacterium rufum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1202..1756
DNA (555bp) protein (185aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI000363CCBF
SAM-dependent methyltransferase {ECO:0000313|EMBL:KGI69484.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_3462_3
Dickeya zeae, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2255..3184)
DNA (930bp) protein (310aa)
Transcriptional regulator, AraC family Tax=Dickeya zeae (strain Ech1591) RepID=C6CFN8_DICZE
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT06564.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya zeae (strain Ech1591).;"
PLM1_60_b1_redo_sep16_scaffold_3462_4
Dickeya zeae, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3188..4099
DNA (912bp) protein (304aa)
NmrA family protein Tax=Dickeya zeae (strain Ech1591) RepID=C6CFN7_DICZE
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ACT06563.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya zeae (strain Ech1591).;"
PLM1_60_b1_redo_sep16_scaffold_3462_5
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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4110..4550
DNA (441bp) protein (147aa)
hypothetical protein Tax=Rhodococcus opacus RepID=UPI00029CB0DE
Uncharacterized protein {ECO:0000313|EMBL:GAF48587.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
Uncharacterized protein yesE
PLM1_60_b1_redo_sep16_scaffold_3462_6
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4886..5461)
DNA (576bp) protein (192aa)
type 11 methyltransferase Tax=Salinispora pacifica RepID=UPI000372AABA
methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADL46577.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_3462_7
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(5605..5940)
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0LAK2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH20849.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_3462_8
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6239..7051)
DNA (813bp) protein (271aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI000361B69F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF70462.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM1_60_b1_redo_sep16_scaffold_3462_9
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7005..7901)
DNA (897bp) protein (299aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI0003633194
integrase
Transposase {ECO:0000313|EMBL:EIV92822.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
PLM1_60_b1_redo_sep16_scaffold_3462_10
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8068..8343
DNA (276bp) protein (92aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003637EFE
beta-lactamase class B
Beta-lactamase class B {ECO:0000313|EMBL:AEK45101.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_60_b1_redo_sep16_scaffold_3462_11
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8310..9047
DNA (738bp) protein (246aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003637EFE
beta-lactamase class B
Beta-lactamase class B {ECO:0000313|EMBL:AEK45101.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_60_b1_redo_sep16_scaffold_3462_12
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(9162..9689)
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JWE8_STRHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY86287.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
PLM1_60_b1_redo_sep16_scaffold_3462_13
unknown

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comp(9686..9811)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_3462_14
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

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comp(10589..10834)
DNA (246bp) protein (82aa)
ABC transporter Tax=Frankia sp. BMG5.12 RepID=UPI000363318A
hypothetical protein
Tax=RBG_13_Chloroflexi_54_8_curated
Displaying 14 items

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