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PLM1_60_b1_redo_sep16_scaffold_6030

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_6030_1

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comp(6..410)
DNA (405bp) protein (135aa)
Putative uncharacterized protein Tax=uncultured soil bacterium RepID=E2D2F9_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADK54823.1}; species="Bacteria; environmental samples.;" source="uncultured soil bacterium.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_6030_2

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682..1335
DNA (654bp) protein (218aa)
Two component response regulator Tax=uncultured soil bacterium RepID=E2D2F2_9BACT
Two component response regulator {ECO:0000313|EMBL:ADK54817.1}; species="Bacteria; environmental samples.;" source="uncultured soil bacterium.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_6030_3

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1344..2636
DNA (1293bp) protein (431aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; environmental samples.;" source="uncultured soil bacterium.;"
Histidine kinase Tax=uncultured soil bacterium RepID=E2D2F1_9BACT
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_6030_4
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2681..2866)
DNA (186bp) protein (62aa)
Monooxygenase Tax=Nocardioidaceae bacterium Broad-1 RepID=E9USS8_9ACTO
Monooxygenase {ECO:0000313|EMBL:EGD43876.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
monooxygenase fad-binding protein
PLM1_60_b1_redo_sep16_scaffold_6030_5
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(3424..4509)
DNA (1086bp) protein (362aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GX69_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL85356.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_6030_6
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4816..5013
DNA (198bp) protein (66aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00035D29A2
Pterin-4-alpha-carbinolamine dehydratase {ECO:0000313|EMBL:KGN43103.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
peptidase S1 and S6, chymotrypsin/Hap
PLM1_60_b1_redo_sep16_scaffold_6030_7
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5190..6014
DNA (825bp) protein (275aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00035F4A6A
Putative dioxygenase {ECO:0000313|EMBL:EAP99321.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_6030_8
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6326..7288
DNA (963bp) protein (321aa)
Putative uncharacterized protein Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P2T5_STRVO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEM82436.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
PLM1_60_b1_redo_sep16_scaffold_6030_9
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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7285..7560
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B5Y6_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ91440.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_6030_10
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7938..8252)
DNA (315bp) protein (105aa)
hypothetical protein Tax=Actinoalloteichus spitiensis RepID=UPI0002EEA63C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP57512.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
PLM1_60_b1_redo_sep16_scaffold_6030_11
unknown

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comp(8249..8803)
DNA (555bp) protein (185aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_6030_12
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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9108..10274
DNA (1167bp) protein (389aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003705395
histidine kinase
PLM1_60_b1_redo_sep16_scaffold_6030_13
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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10271..10909
DNA (639bp) protein (213aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000362F72A
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACZ38987.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM1_60_b1_redo_sep16_scaffold_6030_14
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11521..11775
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Micromonospora RepID=E8S4Z2_MICSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL49698.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_6030_15
unknown

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comp(11759..12367)
DNA (609bp) protein (203aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_6030_16
unknown

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12388..12696
DNA (309bp) protein (103aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_6030_17
unknown

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12754..13119
DNA (366bp) protein (122aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_6030_18
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13107..13436)
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=Micromonospora sp. (strain L5) RepID=E8S1F2_MICSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH17711.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
PLM1_60_b1_redo_sep16_scaffold_6030_19
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(13426..14064)
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V1T6_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EWC63001.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_6030_20
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14397..14930)
DNA (534bp) protein (178aa)
Integrase catalytic region Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P845_STRVO
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:AEM85846.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
Displaying 20 items

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