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PLM1_60_b1_redo_sep16_scaffold_37

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_37_1
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3..932
DNA (930bp) protein (310aa)
Putative F420-dependent oxidoreductase Tax=Micromonospora lupini str. Lupac 08 RepID=I0L9Q2_9ACTO
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60658.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
monooxygenase
PLM1_60_b1_redo_sep16_scaffold_37_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(991..2286)
DNA (1296bp) protein (432aa)
Uncharacterized protein Tax=Eimeria mitis RepID=U6KF78_9EIME
PPOX class putative F420-dependent enzyme {ECO:0000313|EMBL:EXG80835.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
histone
PLM1_60_b1_redo_sep16_scaffold_37_3
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2384..3028)
DNA (645bp) protein (215aa)
Octanoyltransferase {ECO:0000255|HAMAP-Rule:MF_00013}; EC=2.3.1.181 {ECO:0000255|HAMAP-Rule:MF_00013};; Lipoate-protein ligase B {ECO:0000255|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000255|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000255|HAMAP-Rule:MF_00013}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
octanoyltransferase Tax=Salinispora pacifica RepID=UPI00037D3724
lipB; lipoate-protein ligase B
PLM1_60_b1_redo_sep16_scaffold_37_4
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3130..3591
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PVT7_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB29594.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_37_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3600..4421)
DNA (822bp) protein (274aa)
hypothetical protein Tax=Longispora albida RepID=UPI00036AFEB5
Uncharacterized protein {ECO:0000313|EMBL:EXG80837.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_37_6
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4591..5334)
DNA (744bp) protein (248aa)
hypothetical protein Tax=Actinoalloteichus spitiensis RepID=UPI000379401C
Peptidase {ECO:0000313|EMBL:KGM03951.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
peptidase S51 dipeptidase E
PLM1_60_b1_redo_sep16_scaffold_37_7
unknown

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5501..6223
DNA (723bp) protein (241aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_37_8
Chaetomium thermophilum, Chaetomium, Sordariales, Sordariomycetidae, Ascomycota, Fungi

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comp(6302..7177)
DNA (876bp) protein (292aa)
Putative uncharacterized protein Tax=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) RepID=G0SAQ2_CHATD
Putative uncharacterized protein {ECO:0000313|EMBL:EGS19824.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Chaetomium.;" source="Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719).;"
PLM1_60_b1_redo_sep16_scaffold_37_9
unknown

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7324..7620
DNA (297bp) protein (99aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_37_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7632..8528)
DNA (897bp) protein (299aa)
Putative epimerase Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YZ56_NOCFA
TIGR01777 family protein {ECO:0000313|EMBL:EXG80839.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
epimerase
PLM1_60_b1_redo_sep16_scaffold_37_11
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8664..10481)
DNA (1818bp) protein (606aa)
sucB; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (EC:2.3.1.61)
hypothetical protein Tax=Longispora albida RepID=UPI000370EDF9
Dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:KGN33153.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
PLM1_60_b1_redo_sep16_scaffold_37_12
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(10653..12032)
DNA (1380bp) protein (460aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Dihydrolipoyl dehydrogenase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SAS7_GEOOG
dihydrolipoamide dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_37_13
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12162..13619)
DNA (1458bp) protein (486aa)
hypothetical protein Tax=Longispora albida RepID=UPI00036B5795
GntR family transcriptional regulator {ECO:0000313|EMBL:KJK58233.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
GntR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_37_14
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13686..14663
DNA (978bp) protein (326aa)
hypothetical protein Tax=Longispora albida RepID=UPI00035F5A2B
transmembrane protein
Transmembrane protein {ECO:0000313|EMBL:AIS02268.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
PLM1_60_b1_redo_sep16_scaffold_37_15
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14688..14996
DNA (309bp) protein (103aa)
Putative uncharacterized protein Tax=Saccharomonospora azurea SZMC 14600 RepID=H0KB80_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EXG80842.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_37_16
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(15141..16643)
DNA (1503bp) protein (501aa)
hypothetical protein Tax=Longispora albida RepID=UPI00036CA1D8
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
peptidase M17 leucyl aminopeptidase domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_37_17
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16801..17940
DNA (1140bp) protein (380aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Aminomethyltransferase Tax=Frankia sp. CN3 RepID=G6HIK8_9ACTO
glycine cleavage system T protein
PLM1_60_b1_redo_sep16_scaffold_37_18
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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18041..18781
DNA (741bp) protein (247aa)
hypothetical protein Tax=Longispora albida RepID=UPI000375B041
Uncharacterized protein {ECO:0000313|EMBL:EST30783.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_37_19
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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18964..19377
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Streptomyces davawensis JCM 4913 RepID=K4QY53_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK25832.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM1_60_b1_redo_sep16_scaffold_37_20
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19385..20143)
DNA (759bp) protein (253aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
Cobalamin synthase Tax=Micromonospora sp. ATCC 39149 RepID=C4RMI3_9ACTO
cobalamin 5'-phosphate synthase
PLM1_60_b1_redo_sep16_scaffold_37_21
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20136..21323)
DNA (1188bp) protein (396aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;"
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Tax=Rhodococcus ruber BKS 20-38 RepID=M2YZD6_9NOCA
PLM1_60_b1_redo_sep16_scaffold_37_22
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21370..21906)
DNA (537bp) protein (179aa)
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase {ECO:0000313|EMBL:EXG80848.1}; EC=2.7.1.156 {ECO:0000313|EMBL:EXG80848.1};; EC=2.7.7.62 {ECO:0000313|EMBL:EXG80848.1};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
cobU; cobinamide kinase / conamide phosphate guanylyltransferase (EC:2.7.1.156 2.7.7.62)
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase Tax=Rhodococcus triatomae BKS 15-14 RepID=M2VF85_9NOCA
PLM1_60_b1_redo_sep16_scaffold_37_23
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21989..22201
DNA (213bp) protein (71aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003665869
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ40147.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_37_24
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22239..23237)
DNA (999bp) protein (333aa)
Aldo/keto reductase Tax=Micromonospora RepID=D9T7B3_MICAI
Oxidoreductase, aldo/keto reductase family {ECO:0000313|EMBL:EWM68401.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
aldo/keto reductase
PLM1_60_b1_redo_sep16_scaffold_37_25
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23418..24203
DNA (786bp) protein (262aa)
Integral membrane protein Tax=Actinoplanes sp. N902-109 RepID=R4LJJ3_9ACTO
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:EXG80851.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
integral membrane protein
PLM1_60_b1_redo_sep16_scaffold_37_26
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24196..24990
DNA (795bp) protein (265aa)
Putative uncharacterized protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RLR5_9ACTO
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60793.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_37_27
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24987..25943
DNA (957bp) protein (319aa)
ABC transporter ATP-binding protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RLR4_9ACTO
ABC-type uncharacterized transport system, ATPase component {ECO:0000313|EMBL:EXG80853.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
ABC transporter-like protein
PLM1_60_b1_redo_sep16_scaffold_37_28
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25940..26557)
DNA (618bp) protein (206aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000381BC8F
Uncharacterized protein {ECO:0000313|EMBL:EXG80854.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_37_29
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26609..27802)
DNA (1194bp) protein (398aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
Quinolinate synthase A Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F1V6_VERMA
quinolinate synthetase
PLM1_60_b1_redo_sep16_scaffold_37_30
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27995..29116
DNA (1122bp) protein (374aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase {ECO:0000313|EMBL:ADL48090.1}; EC=2.7.1.31 {ECO:0000313|EMBL:ADL48090.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
glycerate kinase Tax=Micromonospora sp. CNB394 RepID=UPI00035E8214
Displaying items 1-30 of 86 in total

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