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PLM1_60_b1_redo_sep16_scaffold_118

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_118_1
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

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1..255
DNA (255bp) protein (85aa)
hypothetical protein Tax=Actinopolyspora halophila RepID=UPI0003616AF9
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGI81390.1}; species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
arsR; HTH-type transcriptional regulator CmtR
PLM1_60_b1_redo_sep16_scaffold_118_2
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

252..989
DNA (738bp) protein (246aa)
hypothetical protein Tax=Longispora albida RepID=UPI00037A1A1D
Co/Zn/Cd cation transporters-like protein
Co/Zn/Cd cation transporters-like protein {ECO:0000313|EMBL:AIG80396.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
PLM1_60_b1_redo_sep16_scaffold_118_3
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1381..2493)
DNA (1113bp) protein (371aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003762F98
MFS transporter {ECO:0000313|EMBL:KDE11794.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
major facilitator superfamily MFS_1
PLM1_60_b1_redo_sep16_scaffold_118_4
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2490..3074)
DNA (585bp) protein (195aa)
hypothetical protein, partial Tax=Catelliglobosispora koreensis RepID=UPI00037122D3
hypothetical protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
PLM1_60_b1_redo_sep16_scaffold_118_5
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3078..3302
DNA (225bp) protein (75aa)
Integrase catalytic region Tax=Frankia sp. CN3 RepID=G6HF75_9ACTO
hypothetical protein
Integrase {ECO:0000313|EMBL:KKA41706.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
PLM1_60_b1_redo_sep16_scaffold_118_6
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4398..5042
DNA (645bp) protein (215aa)
Uncharacterized protein Tax=Frankia sp. EUN1f RepID=D3CW15_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFC85105.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_118_7
Pyronema omphalodes, Pyronema, Pezizales, Pezizomycetes, Ascomycota, Fungi

Not on your lists

5601..6167
DNA (567bp) protein (189aa)
Similar to galactan 1,3-beta-galactosidase [Glomerella graminicola M1.001] acc. no. EFQ28391 Tax=Pyronema omphalodes (strain CBS 100304) RepID=U4L066_PYROM
Similar to galactan 1,3-beta-galactosidase [Glomerella graminicola M1.001] acc. no. EFQ28391 {ECO:0000313|EMBL:CCX08372.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Pezizomycetes; Pezizales; Pyronemataceae; Pyronema.;" source="Pyronema omphalodes (strain CBS 100304) (Pyronema confluens).;"
Secreted alpha-galactosidase
PLM1_60_b1_redo_sep16_scaffold_118_8
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6278..7813)
DNA (1536bp) protein (512aa)
Choline dehydrogenase {ECO:0000313|EMBL:EWC62830.1}; EC=1.1.99.1 {ECO:0000313|EMBL:EWC62830.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
oxidoreductase Tax=Patulibacter americanus RepID=UPI0003B53941
oxidoreductase
PLM1_60_b1_redo_sep16_scaffold_118_9
Streptomyces sp. Tu6071, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7897..8664
DNA (768bp) protein (256aa)
Putative thioesterase Tax=Streptomyces sp. Tu6071 RepID=F3ZJI9_9ACTO
Putative thioesterase {ECO:0000313|EMBL:EGJ73074.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu6071.;"
grsT; Gramicidin S biosynthesis protein grsT
PLM1_60_b1_redo_sep16_scaffold_118_10
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8656..9879)
DNA (1224bp) protein (408aa)
3-oxoacyl-[acyl-carrier-protein] synthase, KASII {ECO:0000313|EMBL:EWC62831.1}; EC=2.3.1.41 {ECO:0000313|EMBL:EWC62831.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein Tax=Salinispora pacifica RepID=UPI000361A60B
redR, SC3F7.06c; 3-oxoacyl-ACP synthase
PLM1_60_b1_redo_sep16_scaffold_118_11
Streptomyces lividans, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9876..10118)
DNA (243bp) protein (81aa)
Acyl carrier protein Tax=Streptomyces RepID=O54150_STRCO
redQ, SC3F7.07c; acyl carrier protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ12839.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lividans TK24.;"
PLM1_60_b1_redo_sep16_scaffold_118_12
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10166..11170)
DNA (1005bp) protein (335aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
fabH4; 3-oxoacyl-ACP synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZS62_9ACTO
PLM1_60_b1_redo_sep16_scaffold_118_13
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11360..12850
DNA (1491bp) protein (497aa)
propionyl-CoA carboxylase carboxyltransferase subunit (EC:6.4.1.3)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI00037BC2BA
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) {ECO:0000313|EMBL:EKP93956.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
PLM1_60_b1_redo_sep16_scaffold_118_14
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12856..13629)
DNA (774bp) protein (258aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00037CCA9E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH99267.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_118_15
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14264..15073
DNA (810bp) protein (270aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI000362827E
Uncharacterized protein {ECO:0000313|EMBL:EWC62836.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
PLM1_60_b1_redo_sep16_scaffold_118_16
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15096..20126
DNA (5031bp) protein (1677aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI0003648ADB
Non-ribosomal peptide synthetase {ECO:0000313|EMBL:EWC62837.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
NPRS
PLM1_60_b1_redo_sep16_scaffold_118_17
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20123..24535
DNA (4413bp) protein (1471aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI000371BD50
Non-ribosomal peptide synthetase {ECO:0000313|EMBL:EWC62838.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
non-ribosomal peptide synthase
PLM1_60_b1_redo_sep16_scaffold_118_18
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24532..28734
DNA (4203bp) protein (1401aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000313|EMBL:EWC62839.1}; EC=2.3.1.39 {ECO:0000313|EMBL:EWC62839.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Polyketide synthase type I Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CAR8_MYXFH
polyketide synthase type I
PLM1_60_b1_redo_sep16_scaffold_118_19
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28736..29971
DNA (1236bp) protein (412aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00036FB8BA
Amidohydrolase {ECO:0000313|EMBL:EWC62840.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
peptidase M38
PLM1_60_b1_redo_sep16_scaffold_118_20
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30003..30200
DNA (198bp) protein (66aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00035DB391
Antibiotic synthesis protein MbtH {ECO:0000313|EMBL:ETK37330.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
MbtH domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_118_21
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30197..30820
DNA (624bp) protein (208aa)
NADPH-dependent FMN reductase Tax=Pseudomonas sp. VLB120 RepID=U5VDP2_9PSED
NADPH-dependent FMN reductase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM1_60_b1_redo_sep16_scaffold_118_22
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30817..32463
DNA (1647bp) protein (549aa)
Acetyl-coenzyme A carboxyl transferase alpha chain {ECO:0000313|EMBL:EWC62843.1}; EC=6.4.1.2 {ECO:0000313|EMBL:EWC62843.1};; EC=6.4.1.3 {ECO:0000313|EMBL:EWC62843.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein Tax=Salinispora pacifica RepID=UPI00035E5D06
carboxyl transferase
PLM1_60_b1_redo_sep16_scaffold_118_23
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32540..32869)
DNA (330bp) protein (110aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
Superfamily I DNA and RNA helicase-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BAD1_STRRD
superfamily I DNA and RNA helicase-like protein
PLM1_60_b1_redo_sep16_scaffold_118_24
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32967..34046)
DNA (1080bp) protein (360aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00037FCAEE
Uncharacterized protein {ECO:0000313|EMBL:EWC63116.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_118_25
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34120..34881)
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR Tax=Frankia sp. (strain EuI1c) RepID=E3J3P2_FRASU
dehydrogenase
Dehydrogenase {ECO:0000313|EMBL:AJF63395.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM1_60_b1_redo_sep16_scaffold_118_26
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35037..36467
DNA (1431bp) protein (477aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI00035DB531
EmrB/QacA family drug resistance transporter {ECO:0000313|EMBL:EWC63117.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
drug resistance transporter EmrB/QacA subfamily
PLM1_60_b1_redo_sep16_scaffold_118_27
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36626..37270
DNA (645bp) protein (215aa)
Regulatory protein TetR Tax=Micromonospora RepID=D9T1K6_MICAI
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EWM67006.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
regulatory protein TetR
PLM1_60_b1_redo_sep16_scaffold_118_28
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37270..37725
DNA (456bp) protein (152aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00036E9B8D
Uncharacterized protein {ECO:0000313|EMBL:EWC63119.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
thioesterase superfamily protein
PLM1_60_b1_redo_sep16_scaffold_118_29
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37779..38801)
DNA (1023bp) protein (341aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI000363E8FF
O-demethylpuromycin-O-methyltransferase {ECO:0000313|EMBL:EJJ05715.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
O-demethylpuromycin-O-methyltransferase
PLM1_60_b1_redo_sep16_scaffold_118_30
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38894..40093)
DNA (1200bp) protein (400aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI000365BEB8
Kitasatospora griseola strain MF730-N6 RKJC_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ64185.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
NocL
Displaying items 1-30 of 42 in total

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