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PLM1_60_b1_redo_sep16_scaffold_126

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Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_126_1
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1061..2794
DNA (1734bp) protein (578aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:ADD42342.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ADD42342.1};; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000372FDFE
PLM1_60_b1_redo_sep16_scaffold_126_2
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2815..4389
DNA (1575bp) protein (525aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=Micromonospora sp. (strain L5) RepID=E8S5V2_MICSL
UDP-N-acetylmuramyl-tripeptide synthetase
PLM1_60_b1_redo_sep16_scaffold_126_3
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4386..5789
DNA (1404bp) protein (468aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
hypothetical protein Tax=Actinoalloteichus spitiensis RepID=UPI000378F5EF
murF; UDP-N-acetylmuramoyl-tripeptide-d-alanyl-d-alanin e ligase murf
PLM1_60_b1_redo_sep16_scaffold_126_4
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5786..6859
DNA (1074bp) protein (358aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PZX9_STANL
PLM1_60_b1_redo_sep16_scaffold_126_5
Streptomyces griseoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6859..8355
DNA (1497bp) protein (499aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI000380A234
PLM1_60_b1_redo_sep16_scaffold_126_6
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8426..9826
DNA (1401bp) protein (467aa)
hypothetical protein Tax=Longispora albida RepID=UPI000364A25C
cell cycle protein
Cell cycle protein {ECO:0000313|EMBL:ADD43664.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_126_7
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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9823..10914
DNA (1092bp) protein (364aa)
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase Tax=Salinispora arenicola RepID=UPI0003805AE0
PLM1_60_b1_redo_sep16_scaffold_126_8
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10911..12335
DNA (1425bp) protein (475aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
UDP-N-acetylmuramate--L-alanine ligase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VU03_9ACTO
putative UDP-N-acetylmuramoyl-L-alanine ligase
PLM1_60_b1_redo_sep16_scaffold_126_9
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12335..13096
DNA (762bp) protein (254aa)
Polypeptide-transport-associated protein Tax=Actinoplanes sp. N902-109 RepID=R4LJV9_9ACTO
ftsQ; polypeptide-transport-associated protein
Polypeptide-transport-associated protein {ECO:0000313|EMBL:AGL15530.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_126_10
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13308..14438
DNA (1131bp) protein (377aa)
cell division protein FtsZ Tax=Salinispora arenicola RepID=UPI000362AC25
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_126_11
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14872..15897
DNA (1026bp) protein (342aa)
hypothetical protein Tax=Streptomyces RepID=UPI00036124FE
alanine racemase domain-containing protein
Alanine racemase domain protein {ECO:0000313|EMBL:ACZ85832.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_126_12
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15936..16478
DNA (543bp) protein (181aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003786DA3
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_126_13
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16494..16787
DNA (294bp) protein (98aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000377BA84
YggT family protein
YggT family protein {ECO:0000313|EMBL:AEV82664.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_126_14
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16834..17700
DNA (867bp) protein (289aa)
DivIVA family protein Tax=Actinoplanes sp. N902-109 RepID=R4LEP3_9ACTO
diviva domain-containing protein
DivIVA family protein {ECO:0000313|EMBL:AGL15536.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_126_15
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17726..18613
DNA (888bp) protein (296aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VTV0_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ40299.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_126_16
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18730..19026
DNA (297bp) protein (99aa)
hypothetical protein Tax=Longispora albida RepID=UPI000364F6F1
UPF0235 protein MILUP08_45116 {ECO:0000256|HAMAP-Rule:MF_00634}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_126_17
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19023..20528
DNA (1506bp) protein (502aa)
Sodium/hydrogen exchanger Tax=Micromonospora sp. (strain L5) RepID=E8S5W6_MICSL
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ADL47976.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_126_18
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21660..22061
DNA (402bp) protein (134aa)
conjugal transfer protein TraR Tax=Catelliglobosispora koreensis RepID=UPI000381986B
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:CCH20234.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
TraR/DksA family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_126_19
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22097..22624
DNA (528bp) protein (176aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Lipoprotein signal peptidase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SA39_GEOOG
lipoprotein signal peptidase
PLM1_60_b1_redo_sep16_scaffold_126_20
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22656..23567
DNA (912bp) protein (304aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
RNA pseudouridine synthase Tax=Longispora albida RepID=UPI00037183FA
putative pseudouridylate synthase
PLM1_60_b1_redo_sep16_scaffold_126_21
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23581..24423
DNA (843bp) protein (281aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L8T4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH20231.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_126_22
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24433..25356
DNA (924bp) protein (308aa)
Putative N-acetyltransferase Tax=Frankia alni (strain ACN14a) RepID=Q0RAY4_FRAAA
N-acetyltransferase
Putative N-acetyltransferase {ECO:0000313|EMBL:CAJ65406.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM1_60_b1_redo_sep16_scaffold_126_23
Kocuria polaris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25723..26238
DNA (516bp) protein (172aa)
carbonate dehydratase Tax=Kocuria sp. UCD-OTCP RepID=UPI00037B3F5F
Carbonic anhydrase {ECO:0000313|EMBL:KHD96839.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria polaris.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_126_24
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26272..26874
DNA (603bp) protein (201aa)
dienelactone hydrolase Tax=Streptomyces violaceoniger RepID=UPI0003C74B68
Dienelactone hydrolase {ECO:0000313|EMBL:KDN86312.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_126_25
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27430..30960
DNA (3531bp) protein (1177aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III subunit alpha Tax=Salinispora tropica RepID=UPI00035F31C9
PLM1_60_b1_redo_sep16_scaffold_126_26
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31073..32236
DNA (1164bp) protein (388aa)
amidohydrolase Tax=Frankia sp. Iso899 RepID=UPI0003B31C91
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AEH10358.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_60_b1_redo_sep16_scaffold_126_27
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32554..33600
DNA (1047bp) protein (349aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FHP9_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB46418.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_126_28
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33515..34246)
DNA (732bp) protein (244aa)
peptidase S16 Tax=Salinispora pacifica RepID=UPI00036560B6
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60886.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
peptidase S16 lon domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_126_29
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34272..35339)
DNA (1068bp) protein (356aa)
Luciferase-like monooxygenase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WNR2_ACTMD
Alkanal monooxygenase (FMN-linked) {ECO:0000313|EMBL:EWM17633.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
putative protein yvbT
PLM1_60_b1_redo_sep16_scaffold_126_30
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35694..36935
DNA (1242bp) protein (414aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
Histidinol dehydrogenase Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EKY0_STRRM
hisD; histidinol dehydrogenase
Displaying items 1-30 of 70 in total

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