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PLM1_60_b1_redo_sep16_scaffold_201

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_201_1
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..449
DNA (447bp) protein (149aa)
Transposase IS4 family protein Tax=Frankia sp. EUN1f RepID=D3DE97_9ACTO
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:EFC78761.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
PLM1_60_b1_redo_sep16_scaffold_201_2
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

592..1002
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Gordonia rhizosphera NBRC 16068 RepID=K6VXJ3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAB91645.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
diacylglycerol kinase catalytic subunit
PLM1_60_b1_redo_sep16_scaffold_201_3
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

999..1763
DNA (765bp) protein (255aa)
Sphingosine kinase-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BBT9_STRRD
sphingosine kinase
Sphingosine kinase-like protein {ECO:0000313|EMBL:ACZ86158.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_201_4
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1766..2119
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ATS1_STRRD
Uncharacterized protein {ECO:0000313|EMBL:ETK37446.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_201_5
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2200..2610
DNA (411bp) protein (137aa)
Endoribonuclease L-PSP Tax=Nocardia brasiliensis ATCC 700358 RepID=K0ERU6_9NOCA
hypothetical protein
Putative endoribonuclease {ECO:0000313|EMBL:GAJ86274.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
PLM1_60_b1_redo_sep16_scaffold_201_6
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2633..3511)
DNA (879bp) protein (293aa)
Serine/threonine protein kinase involved in cell cycle control-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B9S5_STRRD
serine/threonine protein kinase involved in cell cycle control-like protein
Serine/threonine protein kinase involved in cell cycle control-like protein {ECO:0000313|EMBL:ACZ85938.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_201_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3859..4407)
DNA (549bp) protein (183aa)
Deaminase-reductase domain-containing protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B8S6_STRRD
deaminase-reductase domain-containing protein
Deaminase-reductase domain-containing protein {ECO:0000313|EMBL:ACZ89682.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_201_8
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4670..6196
DNA (1527bp) protein (509aa)
Drug resistance transporter, EmrB/QacA subfamily Tax=Polaromonas sp. CF318 RepID=J2TG90_9BURK
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EJL77422.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
transmembrane efflux protein
PLM1_60_b1_redo_sep16_scaffold_201_9
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6440..7159
DNA (720bp) protein (240aa)
Polysaccharide deacetylase Tax=Micromonospora lupini str. Lupac 08 RepID=I0LES2_9ACTO
Chitooligosaccharide deacetylase (Nodulation protein B) {ECO:0000313|EMBL:EWM67253.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
polysaccharide deacetylase
PLM1_60_b1_redo_sep16_scaffold_201_10
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7290..7487
DNA (198bp) protein (66aa)
hypothetical protein Tax=Streptomyces sp. HmicA12 RepID=UPI0003795DF7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG89065.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_60_b1_redo_sep16_scaffold_201_11
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7544..8773
DNA (1230bp) protein (410aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00037AF6BB
monooxygenase
Monooxygenase {ECO:0000313|EMBL:AGL17304.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_201_12
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8812..9015)
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Streptomyces turgidiscabies Car8 RepID=L7FC54_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ELP69138.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_201_13
unknown

Not on your lists

9342..9734
DNA (393bp) protein (131aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_201_14
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9752..11080)
DNA (1329bp) protein (443aa)
putative Acid phosphatase (EC:3.1.3.2)
Putative Acid phosphatase {ECO:0000313|EMBL:CCG02654.1}; EC=3.1.3.2 {ECO:0000313|EMBL:CCG02654.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
Putative Acid phosphatase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RNA6_BLASD
PLM1_60_b1_redo_sep16_scaffold_201_15
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11543..12580
DNA (1038bp) protein (346aa)
Putative Multicopper oxidase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RJK9_BLASD
putative Multicopper oxidase
Putative Multicopper oxidase {ECO:0000313|EMBL:CCG02314.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM1_60_b1_redo_sep16_scaffold_201_16
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12742..13254
DNA (513bp) protein (171aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003687E50
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:AEB46177.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_201_17
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

13251..14078
DNA (828bp) protein (276aa)
Tax=RBG_16_Chloroflexi_51_9_curated
PLM1_60_b1_redo_sep16_scaffold_201_18
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14662..15321
DNA (660bp) protein (220aa)
Transcriptional regulator, ArsR family Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UUI8_9ACTO
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EGD43240.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
ArsR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_201_19
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15562..16344
DNA (783bp) protein (261aa)
Methylase Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UQU8_9MICC
Methylase {ECO:0000313|EMBL:EMY32771.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
methylase involved in ubiquinone/menaquinone biosynthesis
PLM1_60_b1_redo_sep16_scaffold_201_20
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16402..16767
DNA (366bp) protein (122aa)
Peroxiredoxins-like protein Tax=Mycobacterium rhodesiae JS60 RepID=G4I949_MYCRH
Peroxiredoxin {ECO:0000313|EMBL:ETK35527.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
peroxiredoxin
PLM1_60_b1_redo_sep16_scaffold_201_21
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17480..17785
DNA (306bp) protein (102aa)
Transposase for insertion sequence Tax=Mycobacterium smegmatis MKD8 RepID=L8F616_MYCSM
Transposase for insertion sequence {ECO:0000313|EMBL:ELQ86789.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
transposase, IS4 family protein
PLM1_60_b1_redo_sep16_scaffold_201_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17734..18612
DNA (879bp) protein (293aa)
hypothetical protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026255BF
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB52243.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_60_b1_redo_sep16_scaffold_201_23
unknown

Not on your lists

18756..19259
DNA (504bp) protein (168aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000373EE1E
PLM1_60_b1_redo_sep16_scaffold_201_24
unknown

Not on your lists

19266..19433
DNA (168bp) protein (56aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_201_25
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19718..21355
DNA (1638bp) protein (546aa)
Response regulator receiver protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGK2_ANADF
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABS27848.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM1_60_b1_redo_sep16_scaffold_201_26
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21480..22355
DNA (876bp) protein (292aa)
Type 11 methyltransferase Tax=Streptomyces auratus AGR0001 RepID=J1SBW4_9ACTO
Type 11 methyltransferase {ECO:0000313|EMBL:EJJ08392.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
type 11 methyltransferase
PLM1_60_b1_redo_sep16_scaffold_201_27
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22643..23236)
DNA (594bp) protein (198aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI00034AF196
Transcriptional regulator {ECO:0000313|EMBL:EHR53276.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
TetR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_201_28
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23329..23976
DNA (648bp) protein (216aa)
Methyltransferase type 11 Tax=Streptomyces sp. AA4 RepID=D9V792_9ACTO
Methyltransferase type 11 {ECO:0000313|EMBL:EFL07285.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
type 11 methyltransferase
PLM1_60_b1_redo_sep16_scaffold_201_29
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24093..26546)
DNA (2454bp) protein (818aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003753A5A
Uncharacterized protein {ECO:0000313|EMBL:KJS47337.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
protein of unknown function DUF214
PLM1_60_b1_redo_sep16_scaffold_201_30
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26543..27247)
DNA (705bp) protein (235aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00035D282B
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJS47336.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
ABC transporter
Displaying items 1-30 of 48 in total

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