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PLM1_60_b1_redo_sep16_scaffold_226

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_226_1
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..413)
DNA (411bp) protein (137aa)
hypothetical protein Tax=Streptomyces canus RepID=UPI00036EBC19
putative ABC transporter, ATP-binding/permease protein
Putative ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:AHH19843.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
PLM1_60_b1_redo_sep16_scaffold_226_2
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(416..1675)
DNA (1260bp) protein (420aa)
ABC-type branched-chain amino acid transport systems periplasmic component-like protein Tax=Frankia sp. EUN1f RepID=D3D101_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJK43393.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
putative branched-chain amino acid transport system
PLM1_60_b1_redo_sep16_scaffold_226_3
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1874..4564
DNA (2691bp) protein (897aa)
alpha-glucosidase Tax=Streptomyces viridosporus RepID=UPI0003054474
Uncharacterized protein {ECO:0000313|EMBL:KJK51945.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
glycosyl hydrolase family 98 putative carbohydrate binding module
PLM1_60_b1_redo_sep16_scaffold_226_4
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4637..6169
DNA (1533bp) protein (511aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W8A1_9ACTO
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:AGZ45374.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_226_5
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6308..7852
DNA (1545bp) protein (515aa)
serine protease (EC:3.4.21.-)
Alkaline serine exoprotease A Tax=Amycolatopsis azurea DSM 43854 RepID=M2QTI4_9PSEU
Alkaline serine exoprotease A {ECO:0000313|EMBL:EMD29816.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
PLM1_60_b1_redo_sep16_scaffold_226_6
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7927..9192)
DNA (1266bp) protein (422aa)
chitinase Tax=Streptomyces rapamycinicus RepID=UPI000382F43C
Chitinase {ECO:0000313|EMBL:EXU61888.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
chitinase
PLM1_60_b1_redo_sep16_scaffold_226_7
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9510..10844
DNA (1335bp) protein (445aa)
Glycoside hydrolase family protein {ECO:0000313|EMBL:EFG04117.2}; EC=3.2.1.14 {ECO:0000313|EMBL:EFG04117.2};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037467F4
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_226_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10994..11251
DNA (258bp) protein (86aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI00038125D9
Uncharacterized protein {ECO:0000313|EMBL:CCH16404.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
PLM1_60_b1_redo_sep16_scaffold_226_9
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11245..11667
DNA (423bp) protein (141aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
Ribonuclease VapC Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXV6_9ACTO
Conserved protein of unknown function with PIN domain, possible toxin VapC18
PLM1_60_b1_redo_sep16_scaffold_226_10
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11727..12218
DNA (492bp) protein (164aa)
Transcriptional regulator, MarR family Tax=Frankia sp. (strain CcI3) RepID=Q2JAU9_FRASC
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EWM18666.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
MarR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_226_11
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12296..13765
DNA (1470bp) protein (490aa)
EmrB/QacA family drug resistance transporter Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WW84_9ACTO
drug resistance transporter, EmrB/QacA subfamily
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:AHH17326.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
PLM1_60_b1_redo_sep16_scaffold_226_12
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13848..14999)
DNA (1152bp) protein (384aa)
translocation protein TolB Tax=Longispora albida RepID=UPI00037C264B
Translocation protein TolB {ECO:0000313|EMBL:EYU67971.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_226_13
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15107..15901)
DNA (795bp) protein (265aa)
hypothetical protein Tax=Amycolatopsis benzoatilytica RepID=UPI00037BBBC7
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62080.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_226_14
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15898..16395)
DNA (498bp) protein (166aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036D12BB
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60849.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_226_15
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16440..17867)
DNA (1428bp) protein (476aa)
Oxidoreductase Tax=Actinoplanes sp. N902-109 RepID=R4LAH5_9ACTO
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60850.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
oxidoreductase
PLM1_60_b1_redo_sep16_scaffold_226_16
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18084..18989)
DNA (906bp) protein (302aa)
AraC family transcriptional regulator Tax=Amycolatopsis nigrescens RepID=UPI00036AE955
putative AdpA-family transcriptional regulator
Putative AdpA-family transcriptional regulator {ECO:0000313|EMBL:AGZ44835.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_226_17
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18997..19602)
DNA (606bp) protein (202aa)
Isochorismatase hydrolase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WA71_9ACTO
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:AGZ44836.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_226_18
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19745..20941
DNA (1197bp) protein (399aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000360C18D
dinB; DNA-directed DNA polymerase
PLM1_60_b1_redo_sep16_scaffold_226_19
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21406..23097)
DNA (1692bp) protein (564aa)
alkaline phosphatase (EC:3.1.3.1)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003716F33
Phospholipase D {ECO:0000313|EMBL:EME14428.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
PLM1_60_b1_redo_sep16_scaffold_226_20
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23391..23927)
DNA (537bp) protein (179aa)
VanZ family protein Tax=Micromonospora RepID=D9T079_MICAI
vanz family protein
VanZ family protein {ECO:0000313|EMBL:ADL47315.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_226_21
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24199..25488
DNA (1290bp) protein (430aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI0003477919
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00108.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_226_22
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25485..26390
DNA (906bp) protein (302aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI00034DED27
ABC transporter permease component {ECO:0000313|EMBL:EWM16907.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_226_23
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26387..27199
DNA (813bp) protein (271aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI000346320C
Multiple sugar transporter permease {ECO:0000313|EMBL:EWM16908.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_226_24
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27227..30223
DNA (2997bp) protein (999aa)
Alpha-mannosidase Tax=Saccharopolyspora erythraea RepID=T2S1Z3_SACER
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00105.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_226_25
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30220..31203)
DNA (984bp) protein (328aa)
NAD binding oxidoreductase Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HVW5_9PSEU
Oxidoreductase {ECO:0000313|EMBL:ETK31438.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
oxidoreductase
PLM1_60_b1_redo_sep16_scaffold_226_26
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31304..32512)
DNA (1209bp) protein (403aa)
hypothetical protein Tax=Streptomyces violaceoniger RepID=UPI0003C74C5A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ86559.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_226_27
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32751..33731
DNA (981bp) protein (327aa)
Uncharacterized protein Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JR13_STRHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY87221.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
PLM1_60_b1_redo_sep16_scaffold_226_28
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33754..35334)
DNA (1581bp) protein (527aa)
Uncharacterized protein Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RKJ6_STRVP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA60352.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
PLM1_60_b1_redo_sep16_scaffold_226_29
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35552..35914)
DNA (363bp) protein (121aa)
Thioredoxin Tax=Frankia sp. CN3 RepID=G6H4Z9_9ACTO
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
thioredoxin
PLM1_60_b1_redo_sep16_scaffold_226_30
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36062..37096)
DNA (1035bp) protein (345aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000368F67E
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66995.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
Displaying items 1-30 of 36 in total

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