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PLM1_60_b1_redo_sep16_scaffold_230

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_230_1
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(224..1003)
DNA (780bp) protein (260aa)
Uncharacterized protein Tax=Streptomyces coelicoflavus ZG0656 RepID=H1QSV6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EHN72501.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
SCBAC5H2.02c; hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_230_2
unknown

Not on your lists

1450..2124
DNA (675bp) protein (225aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_230_3
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2680..3267)
DNA (588bp) protein (196aa)
Phosphoribosyltransferase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WBB3_ACTMD
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:ACU39404.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
PLM1_60_b1_redo_sep16_scaffold_230_4
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3417..4361)
DNA (945bp) protein (315aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI0003685D9C
hypothetical protein
SMF family protein {ECO:0000313|EMBL:ACU39403.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
PLM1_60_b1_redo_sep16_scaffold_230_5
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4988..5905
DNA (918bp) protein (306aa)
Short chain dehydrogenase Tax=Rhodococcus ruber BKS 20-38 RepID=M2YU45_9NOCA
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ETT25676.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
short chain dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_230_6
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6165..9251
DNA (3087bp) protein (1029aa)
hypothetical protein Tax=Agromyces italicus RepID=UPI0003B317E2
Uncharacterized protein {ECO:0000313|EMBL:KJK41253.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
peptidase M14 carboxypeptidase A
PLM1_60_b1_redo_sep16_scaffold_230_7
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9319..10476)
DNA (1158bp) protein (386aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:ABK05162.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABK05162.1};; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
Aminotransferase Tax=Arthrobacter sp. (strain FB24) RepID=A0K1J2_ARTS2
PLM1_60_b1_redo_sep16_scaffold_230_8
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(10498..11538)
DNA (1041bp) protein (347aa)
Uncharacterized protein Tax=Mycobacterium vaccae ATCC 25954 RepID=K0V878_MYCVA
hypothetical protein
Tax=RBG_16_KB1_OP1_55_9_curated
PLM1_60_b1_redo_sep16_scaffold_230_9
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11917..12963
DNA (1047bp) protein (349aa)
Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TDS1_MICAI
aliphatic sulfonates family ABC transporter periplasmic ligand-binding protein
Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein {ECO:0000313|EMBL:ADL48804.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_230_10
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12960..13751
DNA (792bp) protein (264aa)
ABC transporter ATP-binding protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0LBI7_9ACTO
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCH21184.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
ABC transporter-like protein
PLM1_60_b1_redo_sep16_scaffold_230_11
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13741..14613
DNA (873bp) protein (291aa)
Binding-protein-dependent transport systems inner membrane component Tax=Micromonospora sp. (strain L5) RepID=E8SB33_MICSL
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADL48806.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_230_12
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14600..15133
DNA (534bp) protein (178aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003727185
Rrf2 family protein, putative transcriptional regulator {ECO:0000313|EMBL:EXG79152.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
putative transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_230_13
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15201..15848
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Micromonospora RepID=E8S887_MICSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL46760.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_230_14
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15858..16409)
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Amycolatopsis azurea DSM 43854 RepID=M2PR12_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EMD21970.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
Hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_230_15
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16572..17339)
DNA (768bp) protein (256aa)
Helix-turn-helix domain-containing protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WAA9_9ACTO
helix-turn-helix domain-containing protein
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:AGZ44881.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_230_16
unknown

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18184..18495
DNA (312bp) protein (104aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_230_17
unknown

Not on your lists

18492..18737
DNA (246bp) protein (82aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_230_trna_1
unknown

Not on your lists

comp(18818..18902)
DNA (85bp)
transferRNA Ser
PLM1_60_b1_redo_sep16_scaffold_230_18
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19128..20585
DNA (1458bp) protein (486aa)
sugar hydrolase Tax=Streptomyces sp. ScaeMP-e10 RepID=UPI000373C2AF
sugar hydrolase
Sugar hydrolase {ECO:0000313|EMBL:AJF65336.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM1_60_b1_redo_sep16_scaffold_230_19
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20865..22985
DNA (2121bp) protein (707aa)
DNA polymerase III, subunits gamma and tau Tax=Micromonospora lupini str. Lupac 08 RepID=I0LDY3_9ACTO
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62639.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
DNA polymerase III subunits gamma and tau
PLM1_60_b1_redo_sep16_scaffold_230_20
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23139..23444
DNA (306bp) protein (102aa)
Nucleoid-associated protein MILUP08_46813 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LDY1_9ACTO
Nucleoid-associated protein MILUP08_46813 {ECO:0000256|HAMAP-Rule:MF_00274}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_230_21
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23445..24044
DNA (600bp) protein (200aa)
Recombination protein RecR Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WBX2_9ACTO
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
putative recombination and repair protein
PLM1_60_b1_redo_sep16_scaffold_230_22
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24279..25307)
DNA (1029bp) protein (343aa)
Putative Threonine aldolase Tax=Streptomyces viridochromogenes Tue57 RepID=L8PIR4_STRVR
Putative Threonine aldolase {ECO:0000313|EMBL:ELS55272.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
L-allo-threonine aldolase
PLM1_60_b1_redo_sep16_scaffold_230_23
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25626..27263
DNA (1638bp) protein (546aa)
peptide ABC transporter substrate-binding protein Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDC22
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EXG79180.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
dipeptide/oligopeptide/nickel ABC transporter periplasmic protein
PLM1_60_b1_redo_sep16_scaffold_230_24
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27334..28338
DNA (1005bp) protein (335aa)
peptide ABC transporter permease Tax=Amycolatopsis nigrescens RepID=UPI000379E4C5
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EXG79181.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
dppB; dipeptide transport system permease protein
PLM1_60_b1_redo_sep16_scaffold_230_25
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28335..29270
DNA (936bp) protein (312aa)
ABC transporter permease Tax=Amycolatopsis nigrescens RepID=UPI000372F7F0
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EXG79182.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
appCC; dipeptide/oligopeptide/nickel ABC transporter permease
PLM1_60_b1_redo_sep16_scaffold_230_26
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29276..30265
DNA (990bp) protein (330aa)
Oligopeptide transport ATP-binding protein OppD Tax=Amycolatopsis azurea DSM 43854 RepID=M2Q836_9PSEU
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:EMD22861.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
peptide/nickel transport system ATP-binding protein
PLM1_60_b1_redo_sep16_scaffold_230_27
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30262..31434
DNA (1173bp) protein (391aa)
peptide ABC transporter ATPase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627E4D
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EXG79184.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
D-methionine ABC transporter, ATP-binding protein
PLM1_60_b1_redo_sep16_scaffold_230_28
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31444..32166
DNA (723bp) protein (241aa)
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase {ECO:0000313|EMBL:EXG79191.1}; EC=4.1.2.17 {ECO:0000313|EMBL:EXG79191.1};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein Tax=Nocardiopsis potens RepID=UPI00035C745C
class II aldolase/adducin family protein
PLM1_60_b1_redo_sep16_scaffold_230_29
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32167..32631
DNA (465bp) protein (155aa)
NUDIX hydrolase Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PZ36_KRIFD
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADB31830.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
Displaying items 1-30 of 63 in total

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