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PLM1_60_b1_redo_sep16_scaffold_235

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_235_1
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

670..2148
DNA (1479bp) protein (493aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037BA069
Putative uncharacterized protein {ECO:0000313|EMBL:EFL08293.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
response regulator receiver and ANTAR domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_235_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2217..2825)
DNA (609bp) protein (203aa)
Putative transcriptional regulator, TetR family Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BBN9_STRRD
TetR family transcriptional regulator
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:ACZ86108.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_235_3
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2930..3403
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Frankia sp. EUN1f RepID=D3D4G8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFC82162.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_235_4
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3541..4638
DNA (1098bp) protein (366aa)
Nitrate reductase (NADH) (EC:1.7.1.1)
Nitrate reductase (NADH) {ECO:0000313|EMBL:ADB76620.1}; EC=1.7.1.1 {ECO:0000313|EMBL:ADB76620.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Nitrate reductase (NADH) Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SEI4_GEOOG
PLM1_60_b1_redo_sep16_scaffold_235_5
unknown

Not on your lists

comp(4635..4910)
DNA (276bp) protein (92aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_235_6
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5001..5351
DNA (351bp) protein (117aa)
Putative uncharacterized protein Tax=Streptomyces sviceus ATCC 29083 RepID=B5HNQ4_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EDY54459.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_235_7
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5385..6071)
DNA (687bp) protein (229aa)
AraC family transcription regulator Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X1Q8_STRVR
AraC family transcriptional regulator {ECO:0000313|EMBL:KDN79008.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
AraC family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_235_8
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6627..7277)
DNA (651bp) protein (217aa)
RNA polymerase Tax=Streptomyces sp. SS RepID=UPI0002DD193F
RNA polymerase {ECO:0000313|EMBL:KJK59545.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
PLM1_60_b1_redo_sep16_scaffold_235_9
Eimeria tenella, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(7386..7739)
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Eimeria tenella RepID=U6KX53_EIMTE
Uncharacterized protein {ECO:0000313|EMBL:CDJ42737.1}; species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria tenella (Coccidian parasite).;"
PLM1_60_b1_redo_sep16_scaffold_235_10
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8059..9675)
DNA (1617bp) protein (539aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000363BF99
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00359.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_235_11
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9798..10631)
DNA (834bp) protein (278aa)
Membrane protein, putative Tax=Amycolatopsis azurea DSM 43854 RepID=M2QGU2_9PSEU
Membrane protein, putative {ECO:0000313|EMBL:EMD25217.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
Conserved putative membrane protein
PLM1_60_b1_redo_sep16_scaffold_235_12
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10706..11824)
DNA (1119bp) protein (373aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K917_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH34037.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_60_b1_redo_sep16_scaffold_235_13
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11906..12559
DNA (654bp) protein (218aa)
Uncharacterized protein Tax=Amycolatopsis azurea DSM 43854 RepID=M2QJ67_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EMD25917.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
Hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_235_14
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12640..13017
DNA (378bp) protein (126aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00036D36E1
Tetratricopeptide domain-containing protein {ECO:0000313|EMBL:KHD73848.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_235_15
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13092..13988
DNA (897bp) protein (299aa)
RDD domain containing protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PWG0_STANL
RDD domain-containing protein
RDD domain containing protein {ECO:0000313|EMBL:ADD41317.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_235_16
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14008..15288)
DNA (1281bp) protein (427aa)
Membrane protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RRA3_9ACTO
Membrane protein {ECO:0000313|EMBL:EEP73648.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
dyp-type peroxidase family
PLM1_60_b1_redo_sep16_scaffold_235_17
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15297..16430)
DNA (1134bp) protein (378aa)
Putative M75-family peptidase Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H9H3_ACTM4
putative M75-family peptidase
Putative M75-family peptidase {ECO:0000313|EMBL:BAL89660.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_235_18
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16466..17317)
DNA (852bp) protein (284aa)
Iron permease FTR1 Tax=Frankia sp. (strain EuI1c) RepID=E3JAG1_FRASU
iron permease FTR1
Iron transporter {ECO:0000313|EMBL:KJK58489.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
PLM1_60_b1_redo_sep16_scaffold_235_19
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17410..18057)
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NC10_KITSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ28741.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
PLM1_60_b1_redo_sep16_scaffold_235_20
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18146..20467
DNA (2322bp) protein (774aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BBG3_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ84186.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_235_21
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20535..21809)
DNA (1275bp) protein (425aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase Tax=Frankia sp. QA3 RepID=I8QV30_9ACTO
PLM1_60_b1_redo_sep16_scaffold_235_22
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21915..23369)
DNA (1455bp) protein (485aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
Adenosylhomocysteinase Tax=Streptomyces clavuligerus RepID=E2Q5D9_STRC2
S-adenosyl-L-homocysteine hydrolase
PLM1_60_b1_redo_sep16_scaffold_235_23
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23366..23803)
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=Patulibacter medicamentivorans RepID=H0E840_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10163.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
MerR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_235_24
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24080..25258)
DNA (1179bp) protein (393aa)
mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:ACZ87794.1}; EC=5.3.1.8 {ECO:0000313|EMBL:ACZ87794.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
Mannose-6-phosphate isomerase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B8I4_STRRD
PLM1_60_b1_redo_sep16_scaffold_235_25
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25260..26222)
DNA (963bp) protein (321aa)
Zinc transporter 9 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VUM8_9ACTO
Zinc transporter 9
Zinc transporter 9 {ECO:0000313|EMBL:AGZ39435.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_235_26
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26299..27441)
DNA (1143bp) protein (381aa)
bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase Tax=Salinispora pacifica RepID=UPI00036BD058
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65284.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase-like
PLM1_60_b1_redo_sep16_scaffold_235_27
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27446..27646)
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SFK5_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB76859.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_235_28
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27688..29061)
DNA (1374bp) protein (458aa)
manB; phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase Tax=Modestobacter marinus (strain BC501) RepID=I4F363_MODMB
Phosphomannomutase {ECO:0000313|EMBL:KGH48133.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
PLM1_60_b1_redo_sep16_scaffold_235_29
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29235..29588)
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4L810_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL14668.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_235_30
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30065..30463
DNA (399bp) protein (133aa)
Putative uncharacterized protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SL96_ACTS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHD78925.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
Displaying items 1-30 of 40 in total

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