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PLM1_60_b1_redo_sep16_scaffold_250

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_250_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22..843)
DNA (822bp) protein (274aa)
Methyltransferase type 11 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN28_PSEUX
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEA26041.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_250_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1112..2572
DNA (1461bp) protein (487aa)
30S ribosomal protein S1 Tax=Nonomuraea coxensis RepID=UPI00036B7D95
30S ribosomal protein S1
Ribosomal protein S1-like protein {ECO:0000313|EMBL:ACZ85923.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_250_3
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2816..3187)
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Micromonospora sp. (strain L5) RepID=E8RXQ4_MICSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWM67965.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
PLM1_60_b1_redo_sep16_scaffold_250_4
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3435..4034
DNA (600bp) protein (200aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus.;"
Dephospho-CoA kinase Tax=Modestobacter marinus (strain BC501) RepID=I4EZH7_MODMB
dephospho-CoA kinase
PLM1_60_b1_redo_sep16_scaffold_250_5
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4359..4811)
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:GAL84488.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
PLM1_60_b1_redo_sep16_scaffold_250_6
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4815..6443)
DNA (1629bp) protein (543aa)
Putative exporter of polyketide antibiotics-like protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A625_THECD
putative exporter of polyketide antibiotics-like protein
Putative exporter of polyketide antibiotics-like protein {ECO:0000313|EMBL:ACZ00124.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_250_7
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6440..7354)
DNA (915bp) protein (305aa)
ABC transporter, ATP-binding protein Tax=Rhodococcus erythropolis SK121 RepID=C3JJK6_RHOER
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDQ04573.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii.;"
ABC transporter ATP-binding protein
PLM1_60_b1_redo_sep16_scaffold_250_8
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7451..7924
DNA (474bp) protein (158aa)
hypothetical protein Tax=Actinopolyspora halophila RepID=UPI00035E7ACA
MarR family transcriptional regulator {ECO:0000313|EMBL:KGI82214.1}; species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_250_9
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7962..10076
DNA (2115bp) protein (705aa)
UvrABC system protein B Tax=Frankia alni (strain ACN14a) RepID=Q0RGY6_FRAAA
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
uvrB; excinuclease ABC subunit B
PLM1_60_b1_redo_sep16_scaffold_250_10
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10185..10475)
DNA (291bp) protein (97aa)
Antibiotic biosynthesis monooxygenase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FGJ7_VERMA
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AEB46332.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_250_11
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10817..11731
DNA (915bp) protein (305aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BAW0_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ91724.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_250_12
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11728..12114
DNA (387bp) protein (129aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI000381A496
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY96848.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_250_13
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12122..12805)
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4LE61_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL13949.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_250_14
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12802..14223)
DNA (1422bp) protein (474aa)
Uncharacterized protein Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X251_SALTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP52951.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_60_b1_redo_sep16_scaffold_250_15
Chondrus crispus, Chondrus, Gigartinales, Florideophyceae, Eukaryota

Not on your lists

comp(14220..15305)
DNA (1086bp) protein (362aa)
Stackhouse genomic scaffold, scaffold_452 Tax=Chondrus crispus RepID=R7QM13_CHOCR
Stackhouse genomic scaffold, scaffold_452 {ECO:0000313|EMBL:CDF39144.1}; species="Eukaryota; Rhodophyta; Florideophyceae; Gigartinales; Gigartinaceae; Chondrus.;" source="Chondrus crispus (Carrageen Irish moss) (Polymorpha crispa).;"
PLM1_60_b1_redo_sep16_scaffold_250_16
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15458..16768)
DNA (1311bp) protein (437aa)
Peptidase S8/S53 subtilisin kexin sedolisin Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F312_VERMA
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEB47791.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_250_17
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16765..18633)
DNA (1869bp) protein (623aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F311_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB47790.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_250_18
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18695..19357)
DNA (663bp) protein (221aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI000375BE2D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB47789.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_250_19
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19515..23516)
DNA (4002bp) protein (1334aa)
Cell division protein FtsK/SpoIIIE Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F309_VERMA
Type VII secretion protein EccCa/type VII secretion protein EccCb {ECO:0000313|EMBL:EXG79262.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
cell division protein FtsK/SpoIIIE
PLM1_60_b1_redo_sep16_scaffold_250_20
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23657..25045
DNA (1389bp) protein (463aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F308_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB47787.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_250_21
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25073..25816)
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F239_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB47786.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_250_22
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25974..27368
DNA (1395bp) protein (465aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F238_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB47785.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_250_23
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27552..27893
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X263_SALTO
hypothetical protein
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_60_b1_redo_sep16_scaffold_250_24
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27922..28215
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F236_VERMA
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_250_25
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28280..29578)
DNA (1299bp) protein (433aa)
Peptidase S8/S53 subtilisin kexin sedolisin Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F235_VERMA
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEB47782.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_250_26
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29745..30137
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F234_VERMA
Uncharacterized protein {ECO:0000313|EMBL:EXG79268.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_250_27
unknown

Not on your lists

30134..30475
DNA (342bp) protein (114aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_250_28
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30545..42724
DNA (12180bp) protein (4060aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F232_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB47779.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_250_29
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42775..46125
DNA (3351bp) protein (1117aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F232_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB47779.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_250_30
unknown

Not on your lists

46103..46762
DNA (660bp) protein (220aa)
Uncharacterized protein Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B2S0_FRADG
hypothetical protein
Displaying items 1-30 of 62 in total

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