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PLM1_60_b1_redo_sep16_scaffold_274

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_274_1
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..2631)
DNA (2631bp) protein (877aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000380B6E7
Uncharacterized protein {ECO:0000313|EMBL:KGM01358.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
YD repeat protein
PLM1_60_b1_redo_sep16_scaffold_274_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3229..3480
DNA (252bp) protein (84aa)
transcriptional regulator Tax=Frankia sp. Iso899 RepID=UPI0003B44096
DNA-binding protein, excisionase family {ECO:0000313|EMBL:EXG80005.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
excisionase family DNA binding domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_274_3
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3561..5459)
DNA (1899bp) protein (633aa)
Putative uncharacterized protein bin=GWC2_Pelobacter_58_13 species=Oxalobacteraceae bacterium IMCC9480 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)
Tax=GWC2_Pelobacteraceae_58_13_curated
PLM1_60_b1_redo_sep16_scaffold_274_4
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5555..6790)
DNA (1236bp) protein (412aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4LMY9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL18361.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_274_5
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6807..7544)
DNA (738bp) protein (246aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WB13_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ45121.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_274_6
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7688..8713)
DNA (1026bp) protein (342aa)
Putative esterase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W5Q2_9ACTO
putative esterase
Putative esterase {ECO:0000313|EMBL:AGZ43256.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_274_7
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10214..12319
DNA (2106bp) protein (702aa)
Chitinase Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EUQ1_STRRM
Chitinase {ECO:0000313|EMBL:ELQ82960.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
chitinase-like protein
PLM1_60_b1_redo_sep16_scaffold_274_8
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12425..12787
DNA (363bp) protein (121aa)
phosphoribosylglycinamide formyltransferase Tax=Glaciibacter superstes RepID=UPI0003B32F5C
Uncharacterized protein {ECO:0000313|EMBL:KHL18938.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
phosphoribosylglycinamide formyltransferase
PLM1_60_b1_redo_sep16_scaffold_274_9
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12784..13152
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Rhodococcus equi NBRC 101255 = C 7 RepID=U5DRF9_COREQ
DifB protein {ECO:0000313|EMBL:EGD24006.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi ATCC 33707.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_274_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(13149..13745)
DNA (597bp) protein (199aa)
Methyltransferase type 12 bin=GWC2_Chloroflexi_73_18 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
type 11 methyltransferase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_60_b1_redo_sep16_scaffold_274_11
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14811..15134
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AY22_FRADG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH08522.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_60_b1_redo_sep16_scaffold_274_12
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15402..16814)
DNA (1413bp) protein (471aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00035F62AB
Lyase {ECO:0000313|EMBL:KFZ80481.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
algL; lyase precursor
PLM1_60_b1_redo_sep16_scaffold_274_13
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17509..18702)
DNA (1194bp) protein (398aa)
MscS Mechanosensitive ion channel Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WHR7_ACTMD
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:EXG80135.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
mechanosensitive ion channel MscS
PLM1_60_b1_redo_sep16_scaffold_274_14
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18746..19720)
DNA (975bp) protein (325aa)
Probable allantoicase {ECO:0000256|HAMAP-Rule:MF_00813}; EC=3.5.3.4 {ECO:0000256|HAMAP-Rule:MF_00813};; Allantoate amidinohydrolase {ECO:0000256|HAMAP-Rule:MF_00813}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
allantoicase Tax=Amycolatopsis methanolica RepID=UPI00035EC919
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_274_15
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19717..21033)
DNA (1317bp) protein (439aa)
Allantoinase Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y597_THEBD
allantoinase
Allantoinase {ECO:0000313|EMBL:ADG89292.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_60_b1_redo_sep16_scaffold_274_16
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21030..23330)
DNA (2301bp) protein (767aa)
Xanthine dehydrogenase D subunit Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q648_STANL
Xanthine dehydrogenase D subunit {ECO:0000313|EMBL:ADD42223.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
xanthine dehydrogenase D subunit
PLM1_60_b1_redo_sep16_scaffold_274_17
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23327..24670)
DNA (1344bp) protein (448aa)
hydroxydechloroatrazine ethylaminohydrolase (EC:3.5.99.3)
Hydroxydechloroatrazine ethylaminohydrolase Tax=Micromonospora sp. ATCC 39149 RepID=C4RL77_9ACTO
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66938.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
PLM1_60_b1_redo_sep16_scaffold_274_18
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24667..25158)
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B6G9_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ85733.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_274_19
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25162..26016)
DNA (855bp) protein (285aa)
Molybdopterin dehydrogenase FAD-binding protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y9D2_THEBD
molybdopterin dehydrogenase FAD-binding protein
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:ADG88052.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_60_b1_redo_sep16_scaffold_274_20
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26022..27374)
DNA (1353bp) protein (451aa)
Urate oxidase (EC:1.7.3.3)
Uricase {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455}; EC=1.7.3.3 {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455};; Urate oxidase {ECO:0000256|PIRNR:PIRNR000241}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI0003755B0A
PLM1_60_b1_redo_sep16_scaffold_274_21
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27551..29071
DNA (1521bp) protein (507aa)
CdaR family transcriptional regulator Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EVT4_9NOCA
Putative transcriptional regulator {ECO:0000313|EMBL:GAJ83788.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
CdaR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_274_22
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29286..30464
DNA (1179bp) protein (393aa)
ATPase Tax=Candidatus Microthrix parvicella RN1 RepID=R4YY90_9ACTN
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:KJE19947.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
putative ATP/GTP binding protein
PLM1_60_b1_redo_sep16_scaffold_274_23
unknown

Not on your lists

30800..31057
DNA (258bp) protein (86aa)
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_274_24
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31052..31891)
DNA (840bp) protein (280aa)
hypothetical protein Tax=Streptomyces sp. Amel2xE9 RepID=UPI00036D19CF
Kitasatospora griseola strain MF730-N6 RKJC_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ63109.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
putative transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_274_25
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31884..32414)
DNA (531bp) protein (177aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00037B7E55
Uncharacterized protein {ECO:0000313|EMBL:EME96930.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_274_26
unknown

Not on your lists

comp(32398..32511)
DNA (114bp) protein (38aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_274_27
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33025..33837
DNA (813bp) protein (271aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N3W0_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ91401.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_274_28
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34072..35286)
DNA (1215bp) protein (405aa)
Uncharacterized protein Tax=Saccharopolyspora erythraea RepID=A4FPE6_SACEN
hypothetical protein
Aldolase {ECO:0000313|EMBL:EQD82295.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM1_60_b1_redo_sep16_scaffold_274_29
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35283..36866)
DNA (1584bp) protein (528aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036B9C5C
putative malate synthase
Putative malate synthase {ECO:0000313|EMBL:AGZ44564.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_274_30
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(36869..37186)
DNA (318bp) protein (106aa)
5-hydroxyisourate hydrolase Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y9D1_THEBD
hydroxyisourate hydrolase
Tax=RBG_16_Actinobacteria_68_21_curated
Displaying items 1-30 of 48 in total

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