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PLM1_60_b1_redo_sep16_scaffold_299

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_299_1
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(112..723)
DNA (612bp) protein (204aa)
MMPL domain protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q543_KRIFD
MMPL domain-containing protein
MMPL domain protein {ECO:0000313|EMBL:ADB36054.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_299_2
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(731..2038)
DNA (1308bp) protein (436aa)
MMPL domain protein Tax=Streptomyces gancidicus BKS 13-15 RepID=M3CPE9_9ACTO
MMPL domain protein {ECO:0000313|EMBL:EMF25913.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 13-15.;"
MMPL domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_299_3
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2121..2444
DNA (324bp) protein (108aa)
Transcriptional regulator, PadR-like family Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q544_KRIFD
PadR-like family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ADB36055.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_299_4
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2502..3107)
DNA (606bp) protein (202aa)
hypothetical protein Tax=Streptomyces RepID=UPI00035F3E9D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36056.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_299_5
unknown

Not on your lists

comp(3357..3494)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_299_6
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3515..4021
DNA (507bp) protein (169aa)
Integrase catalytic region Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B4R8_FRADG
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:AEH09123.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_60_b1_redo_sep16_scaffold_299_7
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4162..4329)
DNA (168bp) protein (56aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MXJ3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EHR53471.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_299_8
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4326..4685)
DNA (360bp) protein (120aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI0003759667
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_70_11
PLM1_60_b1_redo_sep16_scaffold_299_9
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4776..5144
DNA (369bp) protein (123aa)
hypothetical protein Tax=Ornithinimicrobium pekingense RepID=UPI0003B4DC66
Uncharacterized protein {ECO:0000313|EMBL:EAP98683.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_299_10
Streptomyces sp. PAMC26508, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5144..5704
DNA (561bp) protein (187aa)
hypothetical protein Tax=Streptomyces RepID=UPI000363B6FE
MutT/nudix family protein
MutT/nudix family protein {ECO:0000313|EMBL:AGJ58884.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PAMC26508.;"
PLM1_60_b1_redo_sep16_scaffold_299_11
unknown

Not on your lists

comp(5834..5938)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_299_12
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6361..6831)
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4LKI8_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL15780.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_299_13
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6828..7100)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GX46_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL85333.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_299_trna_1
unknown

Not on your lists

comp(7356..7427)
DNA (72bp)
transferRNA Val
PLM1_60_b1_redo_sep16_scaffold_299_14
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7476..7943)
DNA (468bp) protein (156aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=Frankia sp. (strain EuI1c) RepID=E3JCR6_FRASU
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ADP79906.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_60_b1_redo_sep16_scaffold_299_15
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8038..8475)
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VSX0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG80790.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_299_16
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8613..9017)
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Micromonospora RepID=E8S216_MICSL
Uncharacterized protein {ECO:0000313|EMBL:EXG80789.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_299_17
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9170..11902
DNA (2733bp) protein (911aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Pyruvate dehydrogenase E1 component Tax=Micromonospora sp. (strain L5) RepID=E8S215_MICSL
2-oxo-acid dehydrogenase e1 subunit, homodimeric type
PLM1_60_b1_redo_sep16_scaffold_299_18
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11956..12708)
DNA (753bp) protein (251aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI0003756C31
Quercetin 2,3-dioxygenase {ECO:0000313|EMBL:EWT03395.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
pirin
PLM1_60_b1_redo_sep16_scaffold_299_19
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12798..13958
DNA (1161bp) protein (387aa)
Transcriptional regulator, PucR family Tax=Micromonospora lupini str. Lupac 08 RepID=I0L9K3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG80776.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PucR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_299_20
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14038..15216
DNA (1179bp) protein (393aa)
ACP S-malonyltransferase Tax=Salinispora pacifica RepID=UPI000381FD82
acyl transferase
Acyl transferase {ECO:0000313|EMBL:ABV99418.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_60_b1_redo_sep16_scaffold_299_21
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15213..16157
DNA (945bp) protein (315aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
3-oxoacyl-ACP synthase Tax=Micromonospora sp. CNB394 RepID=UPI000373779B
PLM1_60_b1_redo_sep16_scaffold_299_22
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16203..16448
DNA (246bp) protein (82aa)
acyl carrier protein Tax=Actinoplanes globisporus RepID=UPI00037D582A
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
acpP; acyl carrier protein
PLM1_60_b1_redo_sep16_scaffold_299_23
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16445..17704
DNA (1260bp) protein (420aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F3Y6_VERMA
beta-ketoacyl synthase
PLM1_60_b1_redo_sep16_scaffold_299_24
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17739..19163
DNA (1425bp) protein (475aa)
propionyl-CoA carboxylase (EC:6.4.1.3)
Propionyl-CoA carboxylase {ECO:0000313|EMBL:ABP55815.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ABP55815.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
Propionyl-CoA carboxylase Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4XA69_SALTO
PLM1_60_b1_redo_sep16_scaffold_299_25
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19224..20915)
DNA (1692bp) protein (564aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Glycoside hydrolase family 3 domain protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F3Y8_VERMA
glycoside hydrolase family protein
PLM1_60_b1_redo_sep16_scaffold_299_26
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21119..21511)
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F3Y9_VERMA
Uncharacterized protein {ECO:0000313|EMBL:EXG80770.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_299_27
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21664..22641)
DNA (978bp) protein (326aa)
Ion transport 2 domain protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKF3_PSEUX
Kef-type K+ ransport system, predicted NAD-binding component {ECO:0000313|EMBL:EXG80769.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Ion transport 2 domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_299_28
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22779..23435)
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3QAV7_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD44753.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_299_29
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23560..23955)
DNA (396bp) protein (132aa)
Membrane protein-like protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q1V3_KRIFD
Putative membrane protein {ECO:0000313|EMBL:EXG80748.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
Displaying items 1-30 of 46 in total

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