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PLM1_60_b1_redo_sep16_scaffold_301

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_301_1
Streptomyces sp. SM8, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(146..760)
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=Streptomyces sp. SM8 RepID=K1UVV6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EKC92685.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. SM8.;"
PLM1_60_b1_redo_sep16_scaffold_301_2
unknown

Not on your lists

comp(757..1587)
DNA (831bp) protein (277aa)
hypothetical protein Tax=Streptomyces sp. CNT372 RepID=UPI0003787AA6
PLM1_60_b1_redo_sep16_scaffold_301_3
Streptomyces sp. MNU77, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1670..2008)
DNA (339bp) protein (113aa)
hypothetical protein Tax=Streptomyces viridosporus RepID=UPI0002D356A2
Uncharacterized protein {ECO:0000313|EMBL:KIZ22944.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MNU77.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_301_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2005..4059)
DNA (2055bp) protein (685aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AQW2_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ86509.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_301_5
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4056..4994)
DNA (939bp) protein (313aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AQW3_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ86510.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_301_6
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5025..5750
DNA (726bp) protein (242aa)
Uridine kinase Tax=Saccharomonospora cyanea NA-134 RepID=H5XJ38_9PSEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH99871.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_301_7
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5953..8610
DNA (2658bp) protein (886aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902, ECO:0000313|EMBL:CAJ60829.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
dnaE2; error-prone DNA polymerase (EC:2.7.7.7)
Error-prone DNA polymerase Tax=Frankia alni (strain ACN14a) RepID=Q0RNQ7_FRAAA
PLM1_60_b1_redo_sep16_scaffold_301_8
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8671..9420)
DNA (750bp) protein (250aa)
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z3G0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM65215.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
PLM1_60_b1_redo_sep16_scaffold_301_9
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(9505..10443)
DNA (939bp) protein (313aa)
Uncharacterized protein Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NSA2_GRAMM
hypothetical protein
Tax=RBG_16_Acidobacteria_64_8_curated
PLM1_60_b1_redo_sep16_scaffold_301_10
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10695..11069
DNA (375bp) protein (125aa)
Transcriptional regulator, XRE family Tax=Frankia sp. (strain CcI3) RepID=Q2J5S5_FRASC
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABD13367.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM1_60_b1_redo_sep16_scaffold_301_11
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11100..11657
DNA (558bp) protein (186aa)
hypothetical protein Tax=Amycolatopsis alba RepID=UPI00036776DC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD13368.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM1_60_b1_redo_sep16_scaffold_301_12
Streptomyces sp. MBRL 601, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11786..12235)
DNA (450bp) protein (150aa)
Putative uncharacterized protein Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WBM2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KIX80000.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MBRL 601.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_301_13
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12232..14145)
DNA (1914bp) protein (638aa)
Uncharacterized protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NDK0_KITSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ29281.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
PLM1_60_b1_redo_sep16_scaffold_301_14
Mycobacterium parascrofulaceum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14407..15372)
DNA (966bp) protein (322aa)
Uncharacterized protein Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P1S9_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:EFG79990.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium parascrofulaceum ATCC BAA-614.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_301_15
Mycobacterium parascrofulaceum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15332..16129)
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P1S9_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:EFG79990.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium parascrofulaceum ATCC BAA-614.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_301_16
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16129..16425)
DNA (297bp) protein (99aa)
Integrase domain protein SAM domain protein Tax=Mycobacterium tusciae JS617 RepID=H1K9T4_9MYCO
Integrase {ECO:0000313|EMBL:KKC06645.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
phage integrase domain/SAM domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_301_17
Mycobacterium parascrofulaceum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16368..17600)
DNA (1233bp) protein (411aa)
integrase Tax=Streptomyces sp. FxanaD5 RepID=UPI00036FDB78
Phage integrase SAM-like domain protein {ECO:0000313|EMBL:EFG79991.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium parascrofulaceum ATCC BAA-614.;"
phage integrase domain/SAM domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_301_18
unknown

Not on your lists

comp(17703..17918)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_301_19
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18155..19594
DNA (1440bp) protein (480aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI0003604A86
YD repeat-containing protein
YD repeat protein {ECO:0000313|EMBL:ABP56091.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_60_b1_redo_sep16_scaffold_301_20
unknown

Not on your lists

comp(19587..19817)
DNA (231bp) protein (77aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_301_21
Mycobacterium colombiense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19817..20023)
DNA (207bp) protein (69aa)
glyoxalase/bleomycin resistance protein/dioxygenase (EC:1.13.11.-)
hypothetical protein Tax=Gordonia kroppenstedtii RepID=UPI0003668567
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EJO86316.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium colombiense CECT 3035.;"
PLM1_60_b1_redo_sep16_scaffold_301_22
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20213..20782
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L9H4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH20471.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_301_23
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20962..21603)
DNA (642bp) protein (214aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W1G9_9ACTO
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60643.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_301_24
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22054..25986
DNA (3933bp) protein (1311aa)
Adenylate/guanylate cyclase Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WG22_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KJK42868.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_301_25
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26242..27123)
DNA (882bp) protein (294aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI0003670294
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP54439.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_60_b1_redo_sep16_scaffold_301_26
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27432..30035)
DNA (2604bp) protein (868aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L1M4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH17721.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_301_27
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30035..31897)
DNA (1863bp) protein (621aa)
conjugal transfer protein TraC Tax=Salinispora arenicola RepID=UPI00036DBD1F
type IV secretory pathway VirB4 protein-like protein
Type IV secretory pathway VirB4 protein-like protein {ECO:0000313|EMBL:ADL49606.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_301_28
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31894..32865)
DNA (972bp) protein (324aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L1M2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH17719.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_301_29
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32862..34388)
DNA (1527bp) protein (509aa)
Putative permease Tax=Micromonospora lupini str. Lupac 08 RepID=I0L1M1_9ACTO
Putative permease {ECO:0000313|EMBL:CCH17718.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_301_30
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34394..34741)
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L1M0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH17717.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
Displaying items 1-30 of 35 in total

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