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PLM1_60_b1_redo_sep16_scaffold_328

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_328_1
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1082)
DNA (1080bp) protein (360aa)
3-hydroxyacyl-CoA dehydrogenase Tax=Nocardiopsis halotolerans RepID=UPI00034BB87A
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EXG80921.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
enoyl-CoA hydratase/isomerase family protein
PLM1_60_b1_redo_sep16_scaffold_328_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1139..1564)
DNA (426bp) protein (142aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein Tax=Modestobacter marinus (strain BC501) RepID=I4F104_MODMB
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EXG80921.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
PLM1_60_b1_redo_sep16_scaffold_328_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1561..2766)
DNA (1206bp) protein (402aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase Tax=Micromonospora sp. ATCC 39149 RepID=C4REC3_9ACTO
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EXG80922.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_60_b1_redo_sep16_scaffold_328_4
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2989..4206)
DNA (1218bp) protein (406aa)
3'-5' exonuclease Tax=Micromonospora sp. ATCC 39149 RepID=C4REC4_9ACTO
Ribonuclease D {ECO:0000313|EMBL:EXG80924.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
3'-5' exonuclease
PLM1_60_b1_redo_sep16_scaffold_328_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4510..5673
DNA (1164bp) protein (388aa)
Peptidase S1 and S6, chymotrypsin/Hap Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZ04_9ACTO
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:EXG80925.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
peptidase S1 and S6 chymotrypsin/Hap
PLM1_60_b1_redo_sep16_scaffold_328_6
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5711..6613
DNA (903bp) protein (301aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZ05_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG80926.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_328_7
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6617..7177)
DNA (561bp) protein (187aa)
membrane protein Tax=Salinispora arenicola RepID=UPI00036B29CA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV97371.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_60_b1_redo_sep16_scaffold_328_8
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7285..8358
DNA (1074bp) protein (358aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZ07_9ACTO
PLM1_60_b1_redo_sep16_scaffold_328_9
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8397..9299)
DNA (903bp) protein (301aa)
Lipoprotein Tax=Micromonospora lupini str. Lupac 08 RepID=I0KWP0_9ACTO
Lipoprotein {ECO:0000313|EMBL:CCH15987.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_328_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9494..10906
DNA (1413bp) protein (471aa)
protoporphyrinogen oxidase (EC:1.3.3.4)
Protoporphyrinogen oxidase Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PZP6_STANL
Protoporphyrinogen oxidase {ECO:0000313|EMBL:EXG80930.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_60_b1_redo_sep16_scaffold_328_11
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10899..11606
DNA (708bp) protein (236aa)
Putative chlorite dismutase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W816_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG80931.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
putative chlorite dismutase
PLM1_60_b1_redo_sep16_scaffold_328_12
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11610..12467)
DNA (858bp) protein (286aa)
Aminoglycoside phosphotransferase Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BWD3_BEUC1
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACQ78591.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
PLM1_60_b1_redo_sep16_scaffold_328_13
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12757..13170
DNA (414bp) protein (138aa)
prevent-host-death protein Tax=Amycolatopsis alba RepID=UPI000363D3A9
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG73840.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
PLM1_60_b1_redo_sep16_scaffold_328_14
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13167..13592
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B389_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ85569.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_328_15
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13614..14918)
DNA (1305bp) protein (435aa)
Putative secreted protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JQN4_SACES
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:CCH29735.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_60_b1_redo_sep16_scaffold_328_16
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14924..15625)
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JYF1_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH29734.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_60_b1_redo_sep16_scaffold_328_17
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15622..16641)
DNA (1020bp) protein (340aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JZL7_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00962.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_328_18
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16803..16973
DNA (171bp) protein (57aa)
XRE family transcriptional regulator Tax=Frankia sp. Iso899 RepID=UPI0003B65CE1
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAL91163.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_328_19
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17082..17483)
DNA (402bp) protein (134aa)
msrB; peptide methionine sulfoxide reductase msrB (EC:1.8.4.12)
Peptide methionine sulfoxide reductase msrB {ECO:0000313|EMBL:CCG04140.1}; EC=1.8.4.12 {ECO:0000313|EMBL:CCG04140.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
Peptide methionine sulfoxide reductase msrB Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RR60_BLASD
PLM1_60_b1_redo_sep16_scaffold_328_20
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17547..19916)
DNA (2370bp) protein (790aa)
Endonuclease/exonuclease/phosphatase Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PNW1_KRIFD
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AHH97052.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_328_21
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20181..21476)
DNA (1296bp) protein (432aa)
Putative cyclopropane fatty acid synthase Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JW92_STREN
cyclopropane fatty acid synthase
Putative cyclopropane fatty acid synthase {ECO:0000313|EMBL:AEW94461.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
PLM1_60_b1_redo_sep16_scaffold_328_22
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21647..22672
DNA (1026bp) protein (342aa)
ATP-dependent DNA ligase Tax=Frankia sp. Iso899 RepID=UPI0003B4429E
DNA polymerase LigD, polymerase domain {ECO:0000313|EMBL:EXG80935.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_328_23
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22669..23310
DNA (642bp) protein (214aa)
Phosphoribosyltransferase Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HD82_STRPR
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:AIS01372.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
PLM1_60_b1_redo_sep16_scaffold_328_24
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23319..24848)
DNA (1530bp) protein (510aa)
TAP domain-containing protein Tax=Actinoplanes sp. N902-109 RepID=R4LWT9_9ACTO
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EXG80937.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
TAP domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_328_25
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24845..25903)
DNA (1059bp) protein (353aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI0003631D01
ATP-dependent DNA ligase {ECO:0000313|EMBL:EXG80938.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
ATP dependent DNA ligase
PLM1_60_b1_redo_sep16_scaffold_328_26
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26044..26778)
DNA (735bp) protein (245aa)
deaminase Tax=Salinispora pacifica RepID=UPI000379B5A2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB43697.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_328_27
unknown

Not on your lists

26921..27091
DNA (171bp) protein (57aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_328_28
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27097..27558)
DNA (462bp) protein (154aa)
AsnC family transcriptional regulator Tax=Streptomyces albulus CCRC 11814 RepID=S0HPC5_STRA9
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:AIA04641.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus.;"
PLM1_60_b1_redo_sep16_scaffold_328_29
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27697..28794
DNA (1098bp) protein (366aa)
PdhA protein Tax=Streptomyces bottropensis ATCC 25435 RepID=M3EMD8_9ACTO
Pyruvate dehydrogenase {ECO:0000313|EMBL:KFG01736.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
pdhA; pyruvate dehydrogenase E1 protein subunit alpha
PLM1_60_b1_redo_sep16_scaffold_328_30
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28791..29780
DNA (990bp) protein (330aa)
Transketolase central region Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QIE7_CATAD
transketolase
Transketolase central region {ECO:0000313|EMBL:ACU75024.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
Displaying items 1-30 of 40 in total

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