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PLM1_60_b1_redo_sep16_scaffold_335

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_335_1
unknown

Not on your lists

comp(310..1065)
DNA (756bp) protein (252aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_335_2
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1080..2987)
DNA (1908bp) protein (636aa)
Putative uncharacterized protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SDM8_ACTS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV86643.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_335_3
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3952..4965
DNA (1014bp) protein (338aa)
RNA polymerase factor sigma-70 (EC:2.7.7.6)
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:AEB42683.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AEB42683.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
RNA polymerase subunit sigma-70 Tax=Salinispora pacifica RepID=UPI0003782873
PLM1_60_b1_redo_sep16_scaffold_335_4
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5017..5775
DNA (759bp) protein (253aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI0003709303
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase {ECO:0000313|EMBL:EFL05346.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
Short-chain alcohol dehydrogenase of unknown specificity
PLM1_60_b1_redo_sep16_scaffold_335_5
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6140..6571)
DNA (432bp) protein (144aa)
hypothetical protein Tax=Arthrobacter sp. M2012083 RepID=UPI00037C8AED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR30492.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. Rue61a.;"
PLM1_60_b1_redo_sep16_scaffold_335_6
unknown

Not on your lists

comp(6610..7317)
DNA (708bp) protein (236aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_335_7
unknown

Not on your lists

7521..7841
DNA (321bp) protein (107aa)
Integral membrane sensor signal transduction histidine kinase Tax=Frankia sp. CN3 RepID=G6HK74_9ACTO
PLM1_60_b1_redo_sep16_scaffold_335_8
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7899..9029
DNA (1131bp) protein (377aa)
Uncharacterized protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q311_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD39981.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_335_9
unknown

Not on your lists

comp(9036..9731)
DNA (696bp) protein (232aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_335_10
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9924..10334)
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Nocardiopsis alba (strain ATCC BAA-2165 / BE74) RepID=J7KYW9_NOCAA
Uncharacterized protein {ECO:0000313|EMBL:AKG44494.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_335_11
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10802..12259
DNA (1458bp) protein (486aa)
Betaine aldehyde dehydrogenase (EC:1.2.1.8)
NAD-dependent aldehyde dehydrogenase Tax=Saccharomonospora glauca K62 RepID=I1D625_9PSEU
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:EWM18007.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
PLM1_60_b1_redo_sep16_scaffold_335_12
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12277..13938
DNA (1662bp) protein (554aa)
Choline dehydrogenase {ECO:0000256|RuleBase:RU003969}; EC=1.1.99.1 {ECO:0000256|RuleBase:RU003969};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
choline dehydrogenase; K00108 choline dehydrogenase [EC:1.1.99.1] bin=bin8_Chloro species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
choline dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_335_13
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13935..14999
DNA (1065bp) protein (355aa)
Glycine betaine/proline ABC transporter, ATP-binding protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ATB0_STRRD
Glycine/betaine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETK35856.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
glycine betaine/proline ABC transporter ATP-binding protein
PLM1_60_b1_redo_sep16_scaffold_335_14
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

14996..16942
DNA (1947bp) protein (649aa)
binding-protein-dependent transporter inner membrane component bin=bin8_Chloro species=Actinoplanes friuliensis genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
binding-protein-dependent transporter inner membrane component
Tax=CSP1_4_Chloroflexi
PLM1_60_b1_redo_sep16_scaffold_335_15
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16974..17936
DNA (963bp) protein (321aa)
Glycine betaine ABC transporter substrate-binding protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W424_9ACTO
glycine betaine ABC transporter substrate-binding protein
Glycine betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:AGZ43884.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_335_16
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18098..20485
DNA (2388bp) protein (796aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003671030
Glycine cleavage T protein (Aminomethyl transferase) {ECO:0000313|EMBL:AHH96538.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
glycine cleavage T protein (aminomethyl transferase)
PLM1_60_b1_redo_sep16_scaffold_335_17
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20511..21623
DNA (1113bp) protein (371aa)
Putative ring hydroxylating dioxygenase subunit Tax=Streptomyces scabies (strain 87.22) RepID=C9YX98_STRSW
ring hydroxylating dioxygenase subunit
Putative ring hydroxylating dioxygenase subunit {ECO:0000313|EMBL:CBG67878.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
PLM1_60_b1_redo_sep16_scaffold_335_18
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21620..22825
DNA (1206bp) protein (402aa)
sarcosine oxidase subunit beta Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00035F4780
Sarcosine oxidase, beta subunit family protein {ECO:0000313|EMBL:EKX69024.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
soxB; sarcosine oxidase subunit beta
PLM1_60_b1_redo_sep16_scaffold_335_19
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22840..23118
DNA (279bp) protein (93aa)
sarcosine oxidase subunit delta Tax=Amycolatopsis nigrescens RepID=UPI00038249F4
Sarcosine oxidase subunit delta {ECO:0000313|EMBL:KJY24026.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
sarcosine oxidase subunit delta
PLM1_60_b1_redo_sep16_scaffold_335_20
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23115..25889
DNA (2775bp) protein (925aa)
Putative Sarcosine oxidase subunit alpha Tax=Streptomyces afghaniensis 772 RepID=S4MPH3_9ACTO
Putative Sarcosine oxidase subunit alpha {ECO:0000313|EMBL:EPJ35332.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
ferredoxin
PLM1_60_b1_redo_sep16_scaffold_335_21
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25882..26466
DNA (585bp) protein (195aa)
Putative sarcosine oxidase gamma subunit Tax=Streptomyces scabies (strain 87.22) RepID=C9YXA3_STRSW
Sarcosine oxidase subunit gamma {ECO:0000313|EMBL:KFF98695.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
soxG; sarcosine oxidase subunit gamma
PLM1_60_b1_redo_sep16_scaffold_335_22
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26486..27010
DNA (525bp) protein (175aa)
Phosphoglycerate mutase family protein Tax=Streptomyces ipomoeae 91-03 RepID=L1KQE7_9ACTO
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EKX62812.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_335_23
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27060..27881)
DNA (822bp) protein (274aa)
ketose-bisphosphate aldolase (EC:4.1.2.13)
Tagatose-bisphosphate aldolase Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3AT33_STRMB
Tagatose-bisphosphate aldolase {ECO:0000313|EMBL:EME96757.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
PLM1_60_b1_redo_sep16_scaffold_335_24
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27964..28872)
DNA (909bp) protein (303aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI000375F03E
phosphosugar isomerase-like protein
Phosphosugar isomerase-like protein {ECO:0000313|EMBL:AIJ26210.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_335_25
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28997..29782
DNA (786bp) protein (262aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI000363B4D7
Kitasatospora griseola strain MF730-N6 RKJC_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ63247.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
DeoR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_335_26
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29848..31182)
DNA (1335bp) protein (445aa)
Alkaline serine exoprotease A {ECO:0000313|EMBL:EWC63584.1}; EC=3.4.21.- {ECO:0000313|EMBL:EWC63584.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Subtilisin-like serine protease Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TGC6_AMYOR
subtilisin-like serine protease
PLM1_60_b1_redo_sep16_scaffold_335_27
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31734..32738
DNA (1005bp) protein (335aa)
Putative Predicted transcriptional regulator Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JNW1_STREN
transcriptional regulator TrmB
Putative Predicted transcriptional regulator {ECO:0000313|EMBL:CCB73052.1}; Transcriptional regulator, TrmB {ECO:0000313|EMBL:AEW92695.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
PLM1_60_b1_redo_sep16_scaffold_335_28
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32793..33827)
DNA (1035bp) protein (345aa)
hypothetical protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026265DA
hydrolase
Hydrolase {ECO:0000313|EMBL:AIJ21660.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_60_b1_redo_sep16_scaffold_335_29
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34025..35488
DNA (1464bp) protein (488aa)
Carotenoid cleavage dioxygenase Tax=Amycolatopsis mediterranei RepID=D8I3J2_AMYMU
carotenoid cleavage dioxygenase
Carotenoid cleavage dioxygenase {ECO:0000313|EMBL:AEK45611.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_60_b1_redo_sep16_scaffold_335_30
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35485..36675
DNA (1191bp) protein (397aa)
acetyl-CoA C-acyltransferase (EC:2.3.1.16)
Acetyl-CoA C-acyltransferase {ECO:0000313|EMBL:ACZ84527.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ACZ84527.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI000362B581
Displaying items 1-30 of 31 in total

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