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PLM1_60_b1_redo_sep16_scaffold_347

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_347_1
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

261..2081
DNA (1821bp) protein (607aa)
Translation initiation factor IF-2 Tax=Frankia sp. (strain CcI3) RepID=IF2_FRASC
infB; translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
PLM1_60_b1_redo_sep16_scaffold_347_2
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2139..2432
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X4N8_SALTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP53838.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_60_b1_redo_sep16_scaffold_347_3
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2455..2931
DNA (477bp) protein (159aa)
Ribosome-binding factor A Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NTC1_STRVO
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
PLM1_60_b1_redo_sep16_scaffold_347_4
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2956..4287
DNA (1332bp) protein (444aa)
MATE efflux family protein Tax=Actinoplanes sp. N902-109 RepID=R4LLQ5_9ACTO
dinF; MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AGL20312.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_347_5
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4284..5195
DNA (912bp) protein (304aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI000369D788
tRNA pseudouridine synthase B
PLM1_60_b1_redo_sep16_scaffold_347_6
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5276..7075
DNA (1800bp) protein (600aa)
Diguanylate cyclase and serine/threonine protein kinase with TPR repeats Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PQU7_MEIRD
Uncharacterized protein {ECO:0000313|EMBL:KGM09819.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
diguanylate cyclase and serine/threonine protein kinase with TPR repeats
PLM1_60_b1_redo_sep16_scaffold_347_7
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7226..8911
DNA (1686bp) protein (562aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003667138
Uncharacterized protein {ECO:0000313|EMBL:KGM15964.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
diguanylate cyclase
PLM1_60_b1_redo_sep16_scaffold_347_8
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8932..9855
DNA (924bp) protein (308aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
riboflavin kinase Tax=Actinoplanes globisporus RepID=UPI00037385A1
putative riboflavin kinase
PLM1_60_b1_redo_sep16_scaffold_347_9
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10001..10270
DNA (270bp) protein (90aa)
30S ribosomal protein S15 Tax=Modestobacter marinus (strain BC501) RepID=I4F285_MODMB
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_60_b1_redo_sep16_scaffold_347_10
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10612..12834
DNA (2223bp) protein (741aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274805}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274803};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SDV5_GEOOG
PLM1_60_b1_redo_sep16_scaffold_347_11
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12831..14162
DNA (1332bp) protein (444aa)
Peptidase M16 domain protein Tax=Micromonospora sp. (strain L5) RepID=E8S9V9_MICSL
peptidase m16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ADL45042.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_347_12
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14159..14944
DNA (786bp) protein (262aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
dihydrodipicolinate reductase Tax=Salinispora arenicola RepID=UPI0003608AC5
PLM1_60_b1_redo_sep16_scaffold_347_13
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14944..15399
DNA (456bp) protein (152aa)
hypothetical protein Tax=Actinoalloteichus spitiensis RepID=UPI000372E34F
Uncharacterized protein {ECO:0000313|EMBL:CEL16803.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_347_14
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15513..16433
DNA (921bp) protein (307aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00037EBC41
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ40017.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_347_15
Streptomyces sp. NRRL B-1568, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16549..16953
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Streptomyces RepID=M9U3Q3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJY43726.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL B-1568.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_347_16
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17071..17451
DNA (381bp) protein (127aa)
Putative uncharacterized protein Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T405_MICAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL49753.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_347_17
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17681..18337)
DNA (657bp) protein (219aa)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI00035F9C5E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH89742.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_60_b1_redo_sep16_scaffold_347_18
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18334..18900)
DNA (567bp) protein (189aa)
GCN5 N-acetyltransferase Tax=Actinoplanes sp. N902-109 RepID=R4LTL2_9ACTO
GCN5 N-acetyltransferase
GCN5 N-acetyltransferase {ECO:0000313|EMBL:AGL20301.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_347_19
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19009..20352)
DNA (1344bp) protein (448aa)
GntR family transcriptional regulator Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WR13_9ACTO
Transcriptional regulator, GntR family withaminotransferase domain {ECO:0000313|EMBL:CDR05269.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
putative GntR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_347_20
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20396..21427
DNA (1032bp) protein (344aa)
Uncharacterized protein Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2N792_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EIF92889.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488.;"
membrane protein
PLM1_60_b1_redo_sep16_scaffold_347_21
unknown

Not on your lists

21402..21692
DNA (291bp) protein (97aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_347_22
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21749..23008
DNA (1260bp) protein (420aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI000376DFC4
Uncharacterized protein {ECO:0000313|EMBL:EWM65337.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_347_23
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23132..23761
DNA (630bp) protein (210aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI00037A8B4B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV97246.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_60_b1_redo_sep16_scaffold_347_24
unknown

Not on your lists

comp(23823..23957)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_347_25
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23991..24803)
DNA (813bp) protein (271aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00035E7EA8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ43553.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_347_26
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24865..25368)
DNA (504bp) protein (168aa)
regulatory protein Tax=Longispora albida RepID=UPI000382B36D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL18594.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_347_27
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25556..26308
DNA (753bp) protein (251aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
thyX; FAD-dependent thymidylate synthase (EC:2.1.1.148)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B4DF10
PLM1_60_b1_redo_sep16_scaffold_347_28
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26503..27411
DNA (909bp) protein (303aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00037DB501
dihydrodipicolinate synthase
PLM1_60_b1_redo_sep16_scaffold_347_29
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27408..29090
DNA (1683bp) protein (561aa)
ribonuclease Tax=Salinispora pacifica RepID=UPI000368E335
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ABV97249.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_60_b1_redo_sep16_scaffold_347_30
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29333..32605
DNA (3273bp) protein (1091aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI000376939F
ftsK; DNA translocase ftsK
DNA translocase ftsK {ECO:0000313|EMBL:AEV88071.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
Displaying items 1-30 of 35 in total

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