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PLM1_60_b1_redo_sep16_scaffold_396

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_396_1
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..498)
DNA (498bp) protein (166aa)
ABC transporter permease Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VTL8_9ACTO
ABC transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_396_2
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(499..1269)
DNA (771bp) protein (257aa)
multidrug ABC transporter ATPase Tax=Actinoplanes globisporus RepID=UPI00037BDF2F
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:EEP70849.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
PLM1_60_b1_redo_sep16_scaffold_396_3
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1389..1781
DNA (393bp) protein (131aa)
Regulatory protein MerR Tax=Micromonospora RepID=D9T637_MICAI
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EWM68567.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
regulatory protein MerR
PLM1_60_b1_redo_sep16_scaffold_396_4
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1778..2347
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6L4W8_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST36264.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_396_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2374..3537
DNA (1164bp) protein (388aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MQK0_9ACTO
Putative permease {ECO:0000313|EMBL:EXG79576.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_396_6
Streptomyces katrae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3526..3948)
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RLE1_BLASD
Membrane protein {ECO:0000313|EMBL:KJY40058.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces katrae.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_396_7
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4025..4615)
DNA (591bp) protein (197aa)
hypothetical protein Tax=Streptomyces canus RepID=UPI000362B3A1
Uncharacterized protein {ECO:0000313|EMBL:EHN73546.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_396_8
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4765..5148
DNA (384bp) protein (128aa)
hisI; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000255|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000255|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000255|HAMAP-Rule:MF_01021};; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Phosphoribosyl-AMP cyclohydrolase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=HIS3_ACIC1
PLM1_60_b1_redo_sep16_scaffold_396_9
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5145..6650
DNA (1506bp) protein (502aa)
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I {ECO:0000313|EMBL:AGZ40347.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AGZ40347.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
Anthranilate synthase component I Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VU59_9ACTO
PLM1_60_b1_redo_sep16_scaffold_396_10
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6679..7215
DNA (537bp) protein (179aa)
Putative uncharacterized protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RLD7_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP70846.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
Trp biosynthesis associated, transmembrane protein, Oprn/Chp
PLM1_60_b1_redo_sep16_scaffold_396_11
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7229..9610)
DNA (2382bp) protein (794aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000367C4BA
Uncharacterized protein {ECO:0000313|EMBL:CEL20646.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_396_12
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9607..10254)
DNA (648bp) protein (216aa)
Transcriptional regulator, MerR family Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y9B7_THEBD
Conserved hypothetical secreted protein {ECO:0000313|EMBL:CEL20647.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
MerR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_396_13
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10387..11073
DNA (687bp) protein (229aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI00036BD9B1
Two-component system response regulator {ECO:0000313|EMBL:CEL19249.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
phoB; two-component system response regulator
PLM1_60_b1_redo_sep16_scaffold_396_14
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11070..12578
DNA (1509bp) protein (503aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
histidine kinase Tax=Frankia sp. Iso899 RepID=UPI0003B3A9D3
integral membrane sensor signal transduction histidine kinase
PLM1_60_b1_redo_sep16_scaffold_396_15
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12812..13621
DNA (810bp) protein (270aa)
trpC; indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
Indole-3-glycerol phosphate synthase Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SBD4_ACTS5
PLM1_60_b1_redo_sep16_scaffold_396_16
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13618..14955
DNA (1338bp) protein (446aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CCG03185.1}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CCG03185.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
tryptophan synthase subunit beta Tax=Sporichthya polymorpha RepID=UPI0003663B40
PLM1_60_b1_redo_sep16_scaffold_396_17
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14952..15773
DNA (822bp) protein (274aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain Tax=Nocardioides sp. CF8 RepID=R7XX11_9ACTO
PLM1_60_b1_redo_sep16_scaffold_396_18
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15796..16800
DNA (1005bp) protein (335aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI000370FFFA
prolipoprotein diacylglyceryl transferase
PLM1_60_b1_redo_sep16_scaffold_396_19
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16872..18242
DNA (1371bp) protein (457aa)
Beta-lactamase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B1T2_STRRD
penicillin-binding protein, beta-lactamase classC
Penicillin-binding protein, beta-lactamase classC {ECO:0000313|EMBL:AHH95424.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_396_20
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18284..19108)
DNA (825bp) protein (275aa)
acetyltransferase Tax=Micromonospora sp. CNB394 RepID=UPI000364A402
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADL47931.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_396_21
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19232..23779
DNA (4548bp) protein (1516aa)
glutamate synthase (ferredoxin) (EC:1.4.7.1)
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:ADB75818.1}; EC=1.4.7.1 {ECO:0000313|EMBL:ADB75818.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00037235A0
PLM1_60_b1_redo_sep16_scaffold_396_22
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23772..25229
DNA (1458bp) protein (486aa)
gltD; glutamate synthase subunit beta (EC:1.4.1.14)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00036E3B70
NADPH-dependent glutamate synthase beta chain-like oxidoreductase {ECO:0000313|EMBL:EIV96633.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
PLM1_60_b1_redo_sep16_scaffold_396_23
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25466..25966
DNA (501bp) protein (167aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036DBB09
Hemerythrin {ECO:0000313|EMBL:AII07733.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_396_24
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26082..27554
DNA (1473bp) protein (491aa)
dihydropyrimidine dehydrogenase subunit A Tax=Actinoalloteichus spitiensis RepID=UPI00035EA272
glutamate synthase, NADH/NADPH small subunit
Glutamate synthase, NADH/NADPH, small subunit {ECO:0000313|EMBL:ADL47929.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_396_25
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27646..29070
DNA (1425bp) protein (475aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase Tax=Micromonospora RepID=D9T610_MICAI
PLM1_60_b1_redo_sep16_scaffold_396_26
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29105..29983
DNA (879bp) protein (293aa)
acyl-CoA thioesterase Tax=Longispora albida RepID=UPI00036B064A
acyl-CoA thioesterase II
Acyl-CoA thioesterase II {ECO:0000313|EMBL:AEB46363.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_396_trna_1
unknown

Not on your lists

comp(30104..30186)
DNA (83bp)
transferRNA Leu
PLM1_60_b1_redo_sep16_scaffold_396_27
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30248..31126)
DNA (879bp) protein (293aa)
Uncharacterized protein {ECO:0000313|EMBL:ETK36492.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
PLM1_60_b1_redo_sep16_scaffold_396_28
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31256..31849
DNA (594bp) protein (198aa)
transcriptional regulator Tax=Longispora albida RepID=UPI0003646342
response regulator NasT
Putative two-component system transcriptional regulator {ECO:0000313|EMBL:CCH20135.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
PLM1_60_b1_redo_sep16_scaffold_396_29
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31998..33320
DNA (1323bp) protein (441aa)
ABC-type branched-chain amino acid transport system, Extracellular ligand-binding receptor Tax=Modestobacter marinus (strain BC501) RepID=I4EZJ6_MODMB
branched-chain amino acid ABC transporter substrate-binding protein
ABC-type branched-chain amino acid transport system, Extracellular ligand-binding receptor {ECO:0000313|EMBL:CCH88809.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Displaying items 1-30 of 48 in total

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