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PLM1_60_b1_redo_sep16_scaffold_473

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_473_1
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

101..1786
DNA (1686bp) protein (562aa)
hypothetical protein Tax=Smaragdicoccus niigatensis RepID=UPI000373D6F5
poly(3-hydroxyalkanoate) polymerase
Polyhydroxyalkanoic acid synthase {ECO:0000313|EMBL:AIY19060.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
PLM1_60_b1_redo_sep16_scaffold_473_2
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1795..2979
DNA (1185bp) protein (395aa)
Acyl-coenzyme A oxidase 4, peroxisomal {ECO:0000313|EMBL:CCH78301.1}; EC=1.3.3.6 {ECO:0000313|EMBL:CCH78301.1};; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein Tax=Demetria terragena RepID=UPI00036D5C6D
glutaryl-CoA dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_473_3
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2960..3787
DNA (828bp) protein (276aa)
Poly(3-hydroxyalkanoate) depolymerase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S467_GEOOG
poly(3-hydroxyalkanoate) depolymerase
Poly(3-hydroxyalkanoate) depolymerase {ECO:0000313|EMBL:ADB75057.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_473_4
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3800..4267
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Rhodococcus opacus M213 RepID=K8XP91_RHOOP
Uncharacterized protein {ECO:0000313|EMBL:EKT83279.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_473_5
Streptomyces mutabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4311..5072)
DNA (762bp) protein (254aa)
Uncharacterized protein Tax=Modestobacter marinus (strain BC501) RepID=I4F2T7_MODMB
Uncharacterized protein {ECO:0000313|EMBL:KFG77037.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mutabilis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_473_6
Streptomyces mutabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5074..6003)
DNA (930bp) protein (310aa)
ABC transporter related protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SEU4_GEOOG
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFG77043.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mutabilis.;"
ABC transporter
PLM1_60_b1_redo_sep16_scaffold_473_7
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6074..6541
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MUR4_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK28686.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM1_60_b1_redo_sep16_scaffold_473_8
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6644..7645)
DNA (1002bp) protein (334aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000373AD31
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62766.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_473_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7729..8271
DNA (543bp) protein (181aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037C76A7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81559.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM1_60_b1_redo_sep16_scaffold_473_10
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8351..9193)
DNA (843bp) protein (281aa)
hypothetical protein Tax=Longispora albida RepID=UPI00036ECDFC
Lipolytic enzyme {ECO:0000313|EMBL:EEP74524.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_473_11
unknown

Not on your lists

comp(9446..9682)
DNA (237bp) protein (79aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_473_12
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9686..10327)
DNA (642bp) protein (214aa)
Bifunctional DNA primase/polymerase Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T895_MICAI
Uncharacterized protein {ECO:0000313|EMBL:EXG79119.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
bifunctional DNA primase/polymerase
PLM1_60_b1_redo_sep16_scaffold_473_13
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11420..12211)
DNA (792bp) protein (264aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000378C112
Uncharacterized protein {ECO:0000313|EMBL:ETK32637.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_473_14
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12293..13123)
DNA (831bp) protein (277aa)
hypothetical protein Tax=Streptomyces sp. CNS335 RepID=UPI000377C1F2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH97348.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_473_15
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13120..13893)
DNA (774bp) protein (258aa)
hypothetical protein Tax=Streptomyces RepID=UPI000379ACF6
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AKH85963.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_473_16
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14658..14894
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Streptomyces sp. HGB0020 RepID=S2YXX6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD66885.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_473_17
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15177..16058
DNA (882bp) protein (294aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FGE4_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB45082.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_473_18
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16567..17742
DNA (1176bp) protein (392aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6HE22_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ62895.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM1_60_b1_redo_sep16_scaffold_473_19
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17848..21708)
DNA (3861bp) protein (1287aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
Beta-galactosidase Tax=Micromonospora sp. ATCC 39149 RepID=C4RNA3_9ACTO
glycoside hydrolase family protein
PLM1_60_b1_redo_sep16_scaffold_473_20
unknown

Not on your lists

comp(22328..22576)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_473_21
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22663..22959)
DNA (297bp) protein (99aa)
Putative uncharacterized protein Tax=Streptomyces sp. AA4 RepID=D9UY28_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EFL08642.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_473_22
unknown

Not on your lists

comp(23107..23322)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_473_23
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23530..24228)
DNA (699bp) protein (233aa)
Uncharacterized protein Tax=Saccharomonospora glauca K62 RepID=I1D4X5_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EXG79939.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_473_24
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24496..25557)
DNA (1062bp) protein (354aa)
Phycocyanin alpha phycocyanobilin lyase related protein NblB-like protein Tax=Actinoplanes sp. N902-109 RepID=R4LL06_9ACTO
phycocyanin alpha phycocyanobilin lyase related protein NblB-like protein
Phycocyanin alpha phycocyanobilin lyase related protein NblB-like protein {ECO:0000313|EMBL:AGL15900.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_473_25
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25554..25928)
DNA (375bp) protein (125aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Tax=Saccharomonospora marina XMU15 RepID=H5X7W2_9PSEU
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EXG80942.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
putative response regulator receiver domain protein
PLM1_60_b1_redo_sep16_scaffold_473_26
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26126..26809)
DNA (684bp) protein (228aa)
Putative two-component system response regulator Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HIP1_ACTM4
putative two-component system response regulator
Putative two-component system response regulator {ECO:0000313|EMBL:BAL92878.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_473_27
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26806..28704)
DNA (1899bp) protein (633aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI0003603CE9
PAS/PAC sensor signal transduction histidine kinase
PLM1_60_b1_redo_sep16_scaffold_473_28
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28814..29965
DNA (1152bp) protein (384aa)
Sensory box histidine kinase/response regulator Tax=Roseobacter sp. SK209-2-6 RepID=A4EVY8_9RHOB
PAS domain S-box {ECO:0000313|EMBL:EXG79955.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
signal transduction histidine kinase
PLM1_60_b1_redo_sep16_scaffold_473_29
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30048..31103
DNA (1056bp) protein (352aa)
Peptidase M10A Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WL90_ACTMD
Matrixin {ECO:0000313|EMBL:EXG81937.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
peptidase M10A
PLM1_60_b1_redo_sep16_scaffold_473_30
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31138..32241
DNA (1104bp) protein (368aa)
Uncharacterized protein Tax=Rhodococcus erythropolis CCM2595 RepID=T1VSM8_RHOER
Uncharacterized protein {ECO:0000313|EMBL:AJR18318.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein
Displaying 30 items

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