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PLM1_60_b1_redo_sep16_scaffold_622

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_622_1
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..299)
DNA (297bp) protein (99aa)
Putative SAM-dependent methyltransferase Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3A433_STRMB
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:EME99838.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
ubiquinone/menaquinone biosynthesis methyltransferase
PLM1_60_b1_redo_sep16_scaffold_622_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

514..2001
DNA (1488bp) protein (496aa)
Transcriptional regulator, AraC family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCN1_CONWI
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADB49504.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_60_b1_redo_sep16_scaffold_622_3
Tsukamurella paurometabola, Tsukamurella, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2001..2498
DNA (498bp) protein (166aa)
Methylated-DNA/protein-cysteinemethyltransferase Tax=Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) RepID=D5UUX9_TSUPD
methylated-DNA--protein-cysteine methyltransferase
Methylated-DNA/protein-cysteinemethyltransferase {ECO:0000313|EMBL:ADG79697.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae; Tsukamurella.;" source="Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /; NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).;"
PLM1_60_b1_redo_sep16_scaffold_622_4
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2573..3400
DNA (828bp) protein (276aa)
metal-dependent hydrolase Tax=Salinispora pacifica RepID=UPI0002D61618
membrane-bound metal-dependent hydrolase
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:ADD45437.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_622_5
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3594..6551)
DNA (2958bp) protein (986aa)
Exonuclease SbcC Tax=Saccharopolyspora erythraea RepID=T2RYW0_SACER
putative ATP-dependent dsDNA exonuclease
Putative ATP-dependent dsDNA exonuclease {ECO:0000313|EMBL:AHH94274.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_622_6
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6548..7762)
DNA (1215bp) protein (405aa)
Nuclease SbcCD, D subunit Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WKU0_ACTMD
nuclease SbcCD, D subunit
Nuclease SbcCD, D subunit {ECO:0000313|EMBL:ACU34695.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
PLM1_60_b1_redo_sep16_scaffold_622_7
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7841..8803
DNA (963bp) protein (321aa)
stearoyl-CoA 9-desaturase Tax=Streptomyces sp. BoleA5 RepID=UPI00037FBB60
stearoyl-CoA 9-desaturase
Fatty acid desaturase (Membrane) {ECO:0000313|EMBL:AKG43305.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
PLM1_60_b1_redo_sep16_scaffold_622_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8904..10730
DNA (1827bp) protein (609aa)
hypothetical protein Tax=Longispora albida RepID=UPI00037D2671
ABC transporter related {ECO:0000313|EMBL:CCH21261.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
ABC transporter-like protein
PLM1_60_b1_redo_sep16_scaffold_622_9
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10762..12579
DNA (1818bp) protein (606aa)
hypothetical protein Tax=Longispora albida RepID=UPI00036B301A
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABP56217.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_60_b1_redo_sep16_scaffold_622_10
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12626..13759)
DNA (1134bp) protein (378aa)
LacI family transcriptional regulator Tax=Nocardia brasiliensis ATCC 700358 RepID=K0ET74_9NOCA
LacI family transcriptional regulator {ECO:0000313|EMBL:GAM50225.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
LacI family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_622_11
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13740..14795)
DNA (1056bp) protein (352aa)
Ribose ABC transporter, permease protein {ECO:0000313|EMBL:AFP37807.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AFP37807.1};; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155).;"
sugar ABC transporter permease Tax=Glaciibacter superstes RepID=UPI0003B69D02
sugar ABC transporter permease
PLM1_60_b1_redo_sep16_scaffold_622_12
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14792..15586)
DNA (795bp) protein (265aa)
ABC transporter related Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WGD5_ACTMD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU39899.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
PLM1_60_b1_redo_sep16_scaffold_622_13
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15663..16733)
DNA (1071bp) protein (357aa)
Mannose-6-phosphate isomerase Tax=Saccharomonospora azurea SZMC 14600 RepID=H0K3L2_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:KIH98252.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_622_14
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16730..17737)
DNA (1008bp) protein (336aa)
LacI family transcription regulator Tax=Streptomyces canus RepID=UPI0003665F39
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AIR96810.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
PLM1_60_b1_redo_sep16_scaffold_622_15
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18009..19196
DNA (1188bp) protein (396aa)
DNA recombinase Tax=Salinispora arenicola RepID=UPI00036510EF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV96745.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_60_b1_redo_sep16_scaffold_622_16
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19407..20387)
DNA (981bp) protein (327aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase Tax=Micromonospora sp. ATCC 39149 RepID=C4RPS1_9ACTO
PLM1_60_b1_redo_sep16_scaffold_622_17
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20429..21679
DNA (1251bp) protein (417aa)
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
Exodeoxyribonuclease 7 large subunit Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X3A5_SALTO
PLM1_60_b1_redo_sep16_scaffold_622_18
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21695..21919
DNA (225bp) protein (75aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
exodeoxyribonuclease VII small subunit Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI000368FCA1
exodeoxyribonuclease VII small subunit
PLM1_60_b1_redo_sep16_scaffold_622_19
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22045..22956
DNA (912bp) protein (304aa)
sulfate-transporting ATPase (EC:3.6.3.25)
Sulfate-transporting ATPase {ECO:0000313|EMBL:AEH08050.1}; EC=3.6.3.25 {ECO:0000313|EMBL:AEH08050.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Sulfate-transporting ATPase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B680_FRADG
PLM1_60_b1_redo_sep16_scaffold_622_20
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22953..23756
DNA (804bp) protein (268aa)
ABC-2 type transporter Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B679_FRADG
ABC-2 type transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_60_b1_redo_sep16_scaffold_622_21
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23764..25470)
DNA (1707bp) protein (569aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI00036763C0
ATP-dependent DNA helicase RecQ
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ACZ88384.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_622_22
Mycobacterium setense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25649..26155)
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0UYB1_MYCFO
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KHO22646.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium setense.;"
PLM1_60_b1_redo_sep16_scaffold_622_23
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26391..27437
DNA (1047bp) protein (349aa)
Fructose-1,6-bisphosphatase Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MYN6_SACVD
glpX; fructose 1,6-bisphosphatase II
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
PLM1_60_b1_redo_sep16_scaffold_622_24
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27443..28420
DNA (978bp) protein (326aa)
hypothetical protein Tax=Nocardiopsis ganjiahuensis RepID=UPI00034D2547
pfkB carbohydrate kinase family protein
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:AFR10755.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
PLM1_60_b1_redo_sep16_scaffold_622_25
unknown

Not on your lists

comp(28569..28763)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_622_26
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28810..29997)
DNA (1188bp) protein (396aa)
Uncharacterized protein Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I4L3_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EOD65409.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
Fis family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_622_27
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(30279..30752)
DNA (474bp) protein (158aa)
hypothetical protein bin=CNBR_ACT species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
Glr1249 protein {ECO:0000313|EMBL:BAC89190.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM1_60_b1_redo_sep16_scaffold_622_28
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30842..31477
DNA (636bp) protein (212aa)
Transcriptional regulator, MerR family Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AB61_THECD
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ACY99004.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_622_29
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31543..33183
DNA (1641bp) protein (547aa)
fumarate hydratase Tax=Actinomadura flavalba RepID=UPI00036BA70F
hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit {ECO:0000313|EMBL:ACY96666.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_622_30
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33407..34798
DNA (1392bp) protein (464aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
aspA; aspartate ammonia-lyase (EC:4.3.1.1)
Fumarate hydratase class II Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WJX1_9ACTO
Displaying items 1-30 of 37 in total

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