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PLM1_60_b1_redo_sep16_scaffold_690

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_690_1
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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3..350
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BFQ2_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ90213.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_690_2
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(425..1321)
DNA (897bp) protein (299aa)
NUDIX hydrolase Tax=Micromonospora sp. ATCC 39149 RepID=C4RR08_9ACTO
NUDIX hydrolase {ECO:0000313|EMBL:EEP71564.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
nudix hydrolase
PLM1_60_b1_redo_sep16_scaffold_690_3
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1345..2688)
DNA (1344bp) protein (448aa)
Peptidase M16 domain-containing protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FA12_VERMA
peptidase M16 domain-containing protein
Peptidase M16 domain-containing protein {ECO:0000313|EMBL:AEB47123.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_690_4
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2685..3980)
DNA (1296bp) protein (432aa)
Peptidase M16 domain protein Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TDS0_MICAI
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ADL48803.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_690_5
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4071..4805)
DNA (735bp) protein (245aa)
hypothetical protein Tax=Longispora albida RepID=UPI00035E2286
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV88501.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_690_6
unknown

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comp(5056..5256)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_690_7
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(5457..6848)
DNA (1392bp) protein (464aa)
beta-Ala-His dipeptidase (EC:3.4.13.20)
Beta-Ala-His dipeptidase {ECO:0000313|EMBL:CCH90020.1}; EC=3.4.13.20 {ECO:0000313|EMBL:CCH90020.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Beta-Ala-His dipeptidase Tax=Modestobacter marinus (strain BC501) RepID=I4F307_MODMB
PLM1_60_b1_redo_sep16_scaffold_690_8
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7112..8947
DNA (1836bp) protein (612aa)
5'-nucleotidase domain-containing protein Tax=Micromonospora sp. ATCC 39149 RepID=C4RAK7_9ACTO
5'-nucleotidase domain-containing protein {ECO:0000313|EMBL:EEP71639.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
putative 5'-nucleotidase
PLM1_60_b1_redo_sep16_scaffold_690_9
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9115..9954
DNA (840bp) protein (280aa)
Alpha/beta hydrolase Tax=Micromonospora sp. ATCC 39149 RepID=C4RNS5_9ACTO
Alpha/beta hydrolase {ECO:0000313|EMBL:EEP71182.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
alpha/beta hydrolase fold protein
PLM1_60_b1_redo_sep16_scaffold_690_10
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10212..12653
DNA (2442bp) protein (814aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036040CF
M6 family metalloprotease domain-containing protein
M6 family metalloprotease domain protein {ECO:0000313|EMBL:ADL43993.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_690_11
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12831..13325
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VNY1_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHD78533.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
PLM1_60_b1_redo_sep16_scaffold_690_12
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13330..16596)
DNA (3267bp) protein (1089aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
DNA helicase UvrD Tax=Micromonospora sp. CNB394 RepID=UPI00035CBFA4
UvrD/REP helicase
PLM1_60_b1_redo_sep16_scaffold_690_13
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16593..19850)
DNA (3258bp) protein (1086aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
UvrD/REP helicase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FA17_VERMA
UvrD/REP helicase
PLM1_60_b1_redo_sep16_scaffold_690_14
unknown

Not on your lists

comp(19900..21003)
DNA (1104bp) protein (368aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_690_15
unknown

Not on your lists

comp(21000..22616)
DNA (1617bp) protein (539aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_690_16
unknown

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22757..23383
DNA (627bp) protein (209aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_690_17
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23453..24853
DNA (1401bp) protein (467aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase {ECO:0000313|EMBL:ADD44230.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ADD44230.1};; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
hypothetical protein Tax=Longispora albida RepID=UPI000362FF40
PLM1_60_b1_redo_sep16_scaffold_690_18
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24850..25164)
DNA (315bp) protein (105aa)
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding Tax=Micromonospora RepID=D9SYA2_MICAI
Methylated-DNA-protein-cysteine methyltransferase {ECO:0000313|EMBL:EWM67396.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding
PLM1_60_b1_redo_sep16_scaffold_690_19
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25198..25869
DNA (672bp) protein (224aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI00035F6A2B
Alpha/beta hydrolase {ECO:0000313|EMBL:KJK56701.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
putative hydrolase
PLM1_60_b1_redo_sep16_scaffold_690_20
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26140..26259)
DNA (120bp) protein (40aa)
molybdopterin biosynthesis MoeZ Tax=Frankia sp. Iso899 RepID=UPI0003B37A46
Thiazole biosynthesis adenylyltransferase ThiF {ECO:0000313|EMBL:EWM67392.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
putative adenylyltransferase/sulfurtransferase MoeZ
Displaying 20 items

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