ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_699

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_699_1
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..292)
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Streptomyces hygroscopicus subsp. jinggangensis TL01 RepID=M1NIG2_STRHY
Glyoxalase {ECO:0000313|EMBL:EYU66706.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_699_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1362..2660
DNA (1299bp) protein (433aa)
hypothetical protein Tax=Amycolatopsis alba RepID=UPI00036A4CF2
Putative ferric reductase {ECO:0000313|EMBL:EXG81027.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
ferredoxin
PLM1_60_b1_redo_sep16_scaffold_699_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2665..3951
DNA (1287bp) protein (429aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JZB3_SACES
NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:EXG81026.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_699_4
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4012..4245)
DNA (234bp) protein (78aa)
Predicted protein Tax=Streptomyces ghanaensis ATCC 14672 RepID=D5ZNQ4_9ACTO
Predicted protein {ECO:0000313|EMBL:EFE72185.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_699_5
unknown

Not on your lists

4664..5047
DNA (384bp) protein (128aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_699_6
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5080..6099
DNA (1020bp) protein (340aa)
adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase {ECO:0000313|EMBL:ACU35410.1}; EC=3.5.4.4 {ECO:0000313|EMBL:ACU35410.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
Adenosine deaminase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WAE3_ACTMD
PLM1_60_b1_redo_sep16_scaffold_699_7
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6246..7907
DNA (1662bp) protein (554aa)
Carboxypeptidase T {ECO:0000313|EMBL:EWC61362.1}; EC=3.4.17.18 {ECO:0000313|EMBL:EWC61362.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI000364A6B5
peptidase M14, carboxypeptidase A
PLM1_60_b1_redo_sep16_scaffold_699_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7953..8204)
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MS28_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY96451.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_699_9
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8369..9565
DNA (1197bp) protein (399aa)
Major facilitator superfamily MFS_1 (Substrate transporter) Tax=Micromonospora lupini str. Lupac 08 RepID=I0KV68_9ACTO
Major facilitator superfamily MFS_1 (Substrate transporter) {ECO:0000313|EMBL:CCH15465.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
putative MFS transporter
PLM1_60_b1_redo_sep16_scaffold_699_10
unknown

Not on your lists

comp(9510..9686)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_699_11
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10397..11785)
DNA (1389bp) protein (463aa)
Aldehyde Dehydrogenase Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QE41_CATAD
aldehyde dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACU76629.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_60_b1_redo_sep16_scaffold_699_12
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11868..13049)
DNA (1182bp) protein (394aa)
Uncharacterized protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q7W0_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD40465.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_699_13
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13054..14310)
DNA (1257bp) protein (419aa)
Mandelate racemase/muconate lactonizing protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W655_9ACTO
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:AGZ43485.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_699_14
Streptomyces sp. Tu6071, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14310..15236)
DNA (927bp) protein (309aa)
5-dehydro-4-deoxyglucarate dehydratase Tax=Streptomyces sp. SPB74 RepID=B5GDT4_9ACTO
Putative 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000313|EMBL:EGJ75026.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu6071.;"
dihydrodipicolinate synthetase
PLM1_60_b1_redo_sep16_scaffold_699_15
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15264..16136)
DNA (873bp) protein (291aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00037A53D4
sugar transport system, permease
Sugar transport system, permease {ECO:0000313|EMBL:AGZ43486.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_699_16
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16213..17214)
DNA (1002bp) protein (334aa)
Sugar transport system, permease Tax=Streptomyces gancidicus BKS 13-15 RepID=M3DZB7_9ACTO
Sugar transport system, permease {ECO:0000313|EMBL:EMF26426.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 13-15.;"
sugar transport system, permease
PLM1_60_b1_redo_sep16_scaffold_699_17
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17214..18545)
DNA (1332bp) protein (444aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003680324
family 1 extracellular solute-binding protein
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:AGZ43488.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_699_18
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18662..19474
DNA (813bp) protein (271aa)
Transcriptional regulator, IclR family Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q7W6_STANL
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADD40471.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_699_19
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19471..20274
DNA (804bp) protein (268aa)
NAD-dependent epimerase/dehydratase Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V081_9ACTO
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EGD41246.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
fatty aldehyde dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_699_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

20317..20712
DNA (396bp) protein (132aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM1_60_b1_redo_sep16_scaffold_699_21
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20709..21953
DNA (1245bp) protein (415aa)
transporter Tax=Salinispora pacifica RepID=UPI00036FB1C0
Uncharacterized protein {ECO:0000313|EMBL:CCH21723.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
amino acid permease-associated protein
PLM1_60_b1_redo_sep16_scaffold_699_22
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21973..23127)
DNA (1155bp) protein (385aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00036A3ADA
N-acetylglucosamine-6-phosphate deacetylase
PLM1_60_b1_redo_sep16_scaffold_699_23
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23124..24074)
DNA (951bp) protein (317aa)
ROK family transcriptional regulator Tax=Streptomyces viridosporus RepID=UPI0003685106
ROK family transcriptional regulator {ECO:0000313|EMBL:KDN78690.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
sugar kinase
PLM1_60_b1_redo_sep16_scaffold_699_24
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24909..25217
DNA (309bp) protein (103aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B47DC7
Uncharacterized protein {ECO:0000313|EMBL:KID31731.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_699_25
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25222..25968)
DNA (747bp) protein (249aa)
Adenosinetriphosphatase Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FFS8_VERMA
adenosinetriphosphatase
Adenosinetriphosphatase {ECO:0000313|EMBL:AEB47555.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
Displaying 25 items

View Taxonomy