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PLM1_60_b1_redo_sep16_scaffold_850

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_850_1
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..246)
DNA (246bp) protein (82aa)
Putative uncharacterized protein Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T406_MICAI
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR64372.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_850_2
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(251..1480)
DNA (1230bp) protein (410aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H5G4_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL88251.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_850_3
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1492..1656)
DNA (165bp) protein (55aa)
Uncharacterized protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SEE5_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL80180.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM1_60_b1_redo_sep16_scaffold_850_4
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2090..2347)
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Micromonospora sp. (strain L5) RepID=E8S5C5_MICSL
hypothetical protein
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61621.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
PLM1_60_b1_redo_sep16_scaffold_850_5
unknown

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comp(2640..3221)
DNA (582bp) protein (194aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_850_6
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3918..4559
DNA (642bp) protein (214aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HDU0_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL91177.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_850_7
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4679..5689)
DNA (1011bp) protein (337aa)
PKD domain containing protein Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UJK0_CELFN
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:ADG75638.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
PLM1_60_b1_redo_sep16_scaffold_850_8
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5818..6159)
DNA (342bp) protein (114aa)
Thioredoxin Tax=Salinispora arenicola (strain CNS-205) RepID=A8LXJ2_SALAI
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
thioredoxin
PLM1_60_b1_redo_sep16_scaffold_850_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6156..6566)
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Streptomyces albulus CCRC 11814 RepID=S0HNF7_STRA9
Putative transcriptional regulator {ECO:0000313|EMBL:EXG79113.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
MerR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_850_10
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6613..6957
DNA (345bp) protein (115aa)
hypothetical protein Tax=Afipia birgiae RepID=UPI0002F81375
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM1_60_b1_redo_sep16_scaffold_850_11
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7006..7896
DNA (891bp) protein (297aa)
Putative ATPase, AAA family Tax=Modestobacter marinus (strain BC501) RepID=I4F579_MODMB
ATPase {ECO:0000313|EMBL:KGH46774.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
AAA ATPase
PLM1_60_b1_redo_sep16_scaffold_850_12
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7901..8992
DNA (1092bp) protein (364aa)
VWA containing CoxE family protein Tax=Modestobacter marinus (strain BC501) RepID=I4F578_MODMB
VWA containing CoxE family protein
VWA containing CoxE family protein {ECO:0000313|EMBL:CCH90791.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_60_b1_redo_sep16_scaffold_850_13
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8985..10094
DNA (1110bp) protein (370aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S6Z0_GEOOG
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family {ECO:0000313|EMBL:EXG80746.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_850_14
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10403..10987
DNA (585bp) protein (195aa)
coxS; carbon-monoxide dehydrogenase Fe-S binding small subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase Fe-S binding small subunit Tax=Modestobacter marinus (strain BC501) RepID=I4F529_MODMB
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:EWT06765.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
PLM1_60_b1_redo_sep16_scaffold_850_15
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11000..13390
DNA (2391bp) protein (797aa)
carbon monoxide dehydrogenase large subunit (EC:1.2.99.2)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000372F50A
Xanthine dehydrogenase {ECO:0000313|EMBL:EWM14342.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
PLM1_60_b1_redo_sep16_scaffold_850_16
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13387..14232
DNA (846bp) protein (282aa)
coxM2; carbon monoxide dehydrogenase FAD-binding medium chain (EC:1.2.99.2)
Carbon monoxide dehydrogenase FAD-binding medium chain {ECO:0000313|EMBL:CCG05587.1}; EC=1.2.99.2 {ECO:0000313|EMBL:CCG05587.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
Carbon monoxide dehydrogenase FAD-binding medium chain Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RT87_BLASD
PLM1_60_b1_redo_sep16_scaffold_850_17
Streptomyces griseorubens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14301..14966
DNA (666bp) protein (222aa)
carbon monoxide dehydrogenase subunit G Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEE61
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:KEG38443.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseorubens.;"
carbon monoxide dehydrogenase subunit G
PLM1_60_b1_redo_sep16_scaffold_850_18
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15232..15438
DNA (207bp) protein (69aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI01459.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_850_19
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15551..16189)
DNA (639bp) protein (213aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EGP6_THECK
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:AGA58967.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
PLM1_60_b1_redo_sep16_scaffold_850_20
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16179..17324)
DNA (1146bp) protein (382aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
Two-component system sensor kinase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W105_9ACTO
two-component system sensor kinase
PLM1_60_b1_redo_sep16_scaffold_850_21
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17377..17799)
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82HI8_STRAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAC71232.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
PLM1_60_b1_redo_sep16_scaffold_850_22
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(17796..18905)
DNA (1110bp) protein (370aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|SAAS:SAAS00094434};; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
hypothetical protein Tax=Deinococcus apachensis RepID=UPI0003822C08
S-adenosylmethionine--tRNA ribosyltransferase-isomerase
PLM1_60_b1_redo_sep16_scaffold_850_23
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18902..19576)
DNA (675bp) protein (225aa)
Short-chain dehydrogenase/reductase SDR Tax=Modestobacter marinus (strain BC501) RepID=I4EXT5_MODMB
short-chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCH88198.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_60_b1_redo_sep16_scaffold_850_24
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19748..20044)
DNA (297bp) protein (99aa)
Putative pterin-4-alpha-carbinolamine dehydratase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AWE1_FRADG
putative pterin-4-alpha-carbinolamine dehydratase
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000313|EMBL:AEH08342.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_60_b1_redo_sep16_scaffold_850_25
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20267..20572
DNA (306bp) protein (102aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00036D0537
nudix hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:EEP71602.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
PLM1_60_b1_redo_sep16_scaffold_850_26
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20651..21409)
DNA (759bp) protein (253aa)
Putative succinate dehydrogenase iron-sulfur subunit Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HHV9_ACTM4
putative succinate dehydrogenase iron-sulfur subunit
Putative succinate dehydrogenase iron-sulfur subunit {ECO:0000313|EMBL:BAL92596.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_850_27
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21566..23488)
DNA (1923bp) protein (641aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase {ECO:0000313|EMBL:ADB34545.1}; EC=1.4.3.16 {ECO:0000313|EMBL:ADB34545.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
succinate dehydrogenase Tax=Kribbella catacumbae RepID=UPI000375D87A
PLM1_60_b1_redo_sep16_scaffold_850_28
unknown

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comp(23518..23613)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 28 items

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