ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_7055

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_7055_1
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

301..1515
DNA (1215bp) protein (405aa)
Putative integrase/recombinase Tax=Leifsonia rubra CMS 76R RepID=S7VYP2_9MICO
Phage integrase family protein {ECO:0000313|EMBL:EUA08606.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
Putative integrase/recombinase y4rA
PLM1_60_b1_redo_sep16_scaffold_7055_2
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1909..3408
DNA (1500bp) protein (500aa)
Putative integrase/recombinase Tax=Leifsonia rubra CMS 76R RepID=S7XHI3_9MICO
Phage integrase family protein {ECO:0000313|EMBL:EUA08554.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
integrase family protein
PLM1_60_b1_redo_sep16_scaffold_7055_3
Streptomyces bottropensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3409..3873)
DNA (465bp) protein (155aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00035DD9B6
IS1604 transposase {ECO:0000313|EMBL:EMF56395.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bottropensis ATCC 25435.;"
Integrase catalytic subunit
PLM1_60_b1_redo_sep16_scaffold_7055_4
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3819..4166)
DNA (348bp) protein (116aa)
UPI0003C7E2E2 related cluster Tax=unknown RepID=UPI0003C7E2E2
Helix-turn-helix domain protein {ECO:0000313|EMBL:EUA34648.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi 3993.;"
transposase
PLM1_60_b1_redo_sep16_scaffold_7055_5
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4147..4803)
DNA (657bp) protein (219aa)
hypothetical protein Tax=Streptomyces bottropensis RepID=UPI00035D2CED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL24394.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis str. Haarlem/NITR202.;"
PLM1_60_b1_redo_sep16_scaffold_7055_6
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5099..5374
DNA (276bp) protein (92aa)
transposase Tax=Nocardiopsis lucentensis RepID=UPI00036D195F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH97553.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_7055_7
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5593..6222)
DNA (630bp) protein (210aa)
Cob(II)yrinic acid a,c-diamide reductase Tax=Actinomadura madurae LIID-AJ290 RepID=U2PFY8_9ACTO
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR64579.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
putative nitroreductase
PLM1_60_b1_redo_sep16_scaffold_7055_8
unknown

Not on your lists

comp(7156..7377)
DNA (222bp) protein (74aa)
hypothetical protein Tax=Nocardia sp. BMG111209 RepID=UPI000375F1FA
PLM1_60_b1_redo_sep16_scaffold_7055_9
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7384..7530)
DNA (147bp) protein (49aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AXG0_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ83140.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
Displaying 9 items

View Taxonomy