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PLM1_60_b1_redo_sep16_scaffold_7056

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_7056_1
unknown

Not on your lists

comp(2..112)
DNA (111bp) protein (37aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_7056_2
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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687..1418
DNA (732bp) protein (244aa)
Methyltransferase type 11 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LBP0_9ACTO
Methyltransferase type 11 {ECO:0000313|EMBL:CCH21237.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
methyltransferase
PLM1_60_b1_redo_sep16_scaffold_7056_3
unknown

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1578..1826
DNA (249bp) protein (83aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_7056_4
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1840..2073
DNA (234bp) protein (78aa)
Phage integrase Tax=Micromonospora sp. ATCC 39149 RepID=C4RRM3_9ACTO
Phage integrase {ECO:0000313|EMBL:EEP75300.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
DNA integrase/recombinase
PLM1_60_b1_redo_sep16_scaffold_7056_5
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(2159..2692)
DNA (534bp) protein (178aa)
Uncharacterized protein Tax=Frankia sp. (strain EuI1c) RepID=E3IUH5_FRASU
Uncharacterized protein {ECO:0000313|EMBL:KHD75872.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_7056_6
unknown

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2740..3378
DNA (639bp) protein (213aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_7056_7
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3369..3530
DNA (162bp) protein (54aa)
transposase for insertion sequence element Tax=Saccharopolyspora spinosa RepID=UPI0002379EDD
Uncharacterized protein {ECO:0000313|EMBL:KIH97561.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_7056_8
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3527..4249
DNA (723bp) protein (241aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00036BD39B
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:EXG81795.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
HAD-superfamily hydrolase
PLM1_60_b1_redo_sep16_scaffold_7056_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4210..5940)
DNA (1731bp) protein (577aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000378CAC0
VWA domain protein {ECO:0000313|EMBL:EXG80122.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
von Willebrand factor, type A
PLM1_60_b1_redo_sep16_scaffold_7056_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6185..7585
DNA (1401bp) protein (467aa)
pkaA; Serine/threonine-protein kinase PkaA (EC:2.7.11.1)
Serine/threonine protein kinase Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HD99_STRPR
Serine/threonine protein kinase {ECO:0000313|EMBL:EXG80010.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_60_b1_redo_sep16_scaffold_7056_11
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7524..8045
DNA (522bp) protein (174aa)
Uncharacterized protein Tax=Aeromicrobium marinum DSM 15272 RepID=E2S915_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KHL18332.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_7056_12
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8020..8517)
DNA (498bp) protein (166aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI000347720F
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AIF53457.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
PLM1_60_b1_redo_sep16_scaffold_7056_13
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8532..8975
DNA (444bp) protein (148aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003804C75
Putative membrane protein {ECO:0000313|EMBL:ELP67713.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_7056_14
Mycobacterium phlei, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9204..9572
DNA (369bp) protein (123aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003703AA0
Uncharacterized protein {ECO:0000313|EMBL:EID10198.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_7056_15
unknown

Not on your lists

9612..9929
DNA (318bp) protein (106aa)
hypothetical protein Tax=Streptomyces RepID=UPI000380C8A7
PLM1_60_b1_redo_sep16_scaffold_7056_16
unknown

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9910..10008
DNA (99bp) protein (33aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_7056_17
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

Not on your lists

10189..12006
DNA (1818bp) protein (606aa)
Putative ATPase Tax=Synechocystis sp. PCC 7509 RepID=L8L353_9SYNC
ATPase-like protein
Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
PLM1_60_b1_redo_sep16_scaffold_7056_18
Streptomyces griseoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12003..12701
DNA (699bp) protein (233aa)
Integrase catalytic region Tax=Frankia sp. CN3 RepID=G6HHT4_9ACTO
hypothetical protein
Integrase {ECO:0000313|EMBL:EFL37257.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
PLM1_60_b1_redo_sep16_scaffold_7056_19
unknown

Not on your lists

comp(12829..12978)
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 19 items

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