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PLM1_60_b1_redo_sep16_scaffold_1001

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1001_1
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(129..1508)
DNA (1380bp) protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
Histidine kinase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WCC3_ACTMD
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1001_2
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1515..2186)
DNA (672bp) protein (224aa)
Two component transcriptional regulator, winged helix family Tax=Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) RepID=D7AY24_NOCDD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI00396.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_1001_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2309..3259)
DNA (951bp) protein (317aa)
cysteine synthase Tax=Catelliglobosispora koreensis RepID=UPI00036A363A
Cysteine synthase {ECO:0000313|EMBL:EXG80109.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
cysteine synthase
PLM1_60_b1_redo_sep16_scaffold_1001_4
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3391..3666)
DNA (276bp) protein (92aa)
MoaD family protein {ECO:0000313|EMBL:EXG80108.1}; EC=2.8.1.12 {ECO:0000313|EMBL:EXG80108.1};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
sulfur transfer protein ThiS Tax=Salinispora pacifica RepID=UPI000368E0A7
sulfur transfer protein ThiS
PLM1_60_b1_redo_sep16_scaffold_1001_5
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3758..4219)
DNA (462bp) protein (154aa)
Mov34/MPN/PAD-1 family protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SBE3_GEOOG
Mov34/MPN/PAD-1 family protein
Mov34/MPN/PAD-1 family protein {ECO:0000313|EMBL:ADB74091.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_1001_6
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4249..4752)
DNA (504bp) protein (168aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F7D3_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB43191.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_1001_7
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4749..5024)
DNA (276bp) protein (92aa)
ATP-dependent Clp protease adapter protein ClpS Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F7D2_VERMA
ATP-dependent clp protease adaptor protein clps
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
PLM1_60_b1_redo_sep16_scaffold_1001_8
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5105..6391
DNA (1287bp) protein (429aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Nicotinate phosphoribosyltransferase Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MWD3_SACVD
putative nicotinate phosphoribosyltransferase
PLM1_60_b1_redo_sep16_scaffold_1001_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6388..6966
DNA (579bp) protein (193aa)
Isochorismatase hydrolase Tax=Micromonospora sp. (strain L5) RepID=E8S5E4_MICSL
Nicotinamidase-like amidase {ECO:0000313|EMBL:EXG80103.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
isochorismatase hydrolase
PLM1_60_b1_redo_sep16_scaffold_1001_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7032..8228)
DNA (1197bp) protein (399aa)
Phosphoserine phosphatase {ECO:0000313|EMBL:EXG80099.1}; EC=3.1.3.3 {ECO:0000313|EMBL:EXG80099.1};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
serB; phosphoserine phosphatase (EC:3.1.3.3)
phosphoserine phosphatase Tax=Saccharopolyspora erythraea RepID=UPI0001D3142D
PLM1_60_b1_redo_sep16_scaffold_1001_11
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8234..9925)
DNA (1692bp) protein (564aa)
cytochrome c oxidase subunit I (EC:1.9.3.1)
cytochrome C oxidase subunit I Tax=Catelliglobosispora koreensis RepID=UPI00037F6ABC
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:EXG80098.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_60_b1_redo_sep16_scaffold_1001_12
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10082..11725)
DNA (1644bp) protein (548aa)
Methyltransferases-like Tax=Frankia sp. (strain CcI3) RepID=Q2J8K7_FRASC
methyltransferases-like protein
Methyltransferases-like protein {ECO:0000313|EMBL:AHH97137.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_1001_13
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12023..13522
DNA (1500bp) protein (500aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4L8Y2_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL15882.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_1001_14
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13625..14608
DNA (984bp) protein (328aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00035EE45B
Chitinase {ECO:0000313|EMBL:KJY24420.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
chitinase
PLM1_60_b1_redo_sep16_scaffold_1001_15
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14672..15010)
DNA (339bp) protein (113aa)
Uncharacterized protein Tax=Saccharopolyspora erythraea RepID=T2S758_SACER
Lsr2 family protein {ECO:0000313|EMBL:EXG79394.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
lsr2; iron-regulated LSR2 protein precursor
PLM1_60_b1_redo_sep16_scaffold_1001_16
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15379..15723)
DNA (345bp) protein (115aa)
Putative secreted chitin/cellulose-binding protein Tax=Streptomyces viridochromogenes Tue57 RepID=L8PLS9_STRVR
Putative secreted chitin/cellulose-binding protein {ECO:0000313|EMBL:ELS57455.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
cellulose-binding protein
PLM1_60_b1_redo_sep16_scaffold_1001_17
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15720..16286)
DNA (567bp) protein (189aa)
Chitin-binding domain 3 protein Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P3V9_STRVO
Chitin-binding protein {ECO:0000313|EMBL:EXU63002.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
chitin-binding protein
PLM1_60_b1_redo_sep16_scaffold_1001_trna_2
unknown

Not on your lists

comp(16537..16609)
DNA (73bp)
transferRNA Ala
PLM1_60_b1_redo_sep16_scaffold_1001_18
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16684..17253)
DNA (570bp) protein (190aa)
UPF0301 protein MCAG_03997 Tax=Micromonospora sp. ATCC 39149 RepID=C4RRC5_9ACTO
UPF0301 protein CryarDRAFT_1121 {ECO:0000256|HAMAP-Rule:MF_00758}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1001_19
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17426..17611)
DNA (186bp) protein (62aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XN21_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK36471.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM1_60_b1_redo_sep16_scaffold_1001_20
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17714..18526
DNA (813bp) protein (271aa)
Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01963};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
5'-methylthioadenosine phosphorylase (EC:2.4.2.28)
5''''-methylthioadenosine phosphorylase Tax=Actinoplanes globisporus RepID=UPI00037424E6
PLM1_60_b1_redo_sep16_scaffold_1001_21
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18513..18950)
DNA (438bp) protein (146aa)
GCN5-related N-acetyltransferase Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q7N5_STANL
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADD44377.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_1001_22
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18947..20248)
DNA (1302bp) protein (434aa)
hypothetical protein Tax=Rhodococcus sp. R1101 RepID=UPI000367E9E8
Putative uncharacterized protein {ECO:0000313|EMBL:EHK82979.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans AK37.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1001_trna_1
unknown

Not on your lists

comp(21013..21085)
DNA (73bp)
transferRNA Glu
PLM1_60_b1_redo_sep16_scaffold_1001_23
unknown

Not on your lists

comp(21320..21511)
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying 25 items

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