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PLM1_60_b1_redo_sep16_scaffold_1079

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1079_1
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1..1026
DNA (1026bp) protein (342aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Catalase-peroxidase; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
Catalase-peroxidase Tax=Streptomyces ipomoeae 91-03 RepID=L1KIU1_9ACTO
catalase
PLM1_60_b1_redo_sep16_scaffold_1079_2
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(995..1237)
DNA (243bp) protein (81aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI000374C04B
Putative uncharacterized protein {ECO:0000313|EMBL:EEP72634.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1079_3
BJP_IG2103_Methanoregula_55_19, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1234..2574)
DNA (1341bp) protein (447aa)
Tetratricopeptide TPR_2 repeat protein Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JPJ8_BURVG
hypothetical protein
Tax=BJP_IG2103_Methanoregula_55_19
PLM1_60_b1_redo_sep16_scaffold_1079_4
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2967..3401)
DNA (435bp) protein (145aa)
GCN5-related N-acetyltransferase Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2Z5Z2_9PSEU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG76500.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
PLM1_60_b1_redo_sep16_scaffold_1079_5
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4083..5039
DNA (957bp) protein (319aa)
Transcriptional regulator, AraC family Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PTC9_KRIFD
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCH79614.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
AraC family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1079_6
unknown

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5263..6174
DNA (912bp) protein (304aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1079_7
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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6247..7119
DNA (873bp) protein (291aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3N4_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY96159.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_1079_8
Nocardia cyriacigeorgica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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7148..7945
DNA (798bp) protein (266aa)
hypothetical protein Tax=Nocardiopsis valliformis RepID=UPI00034B88AE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCF63730.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
PLM1_60_b1_redo_sep16_scaffold_1079_9
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7974..9395)
DNA (1422bp) protein (474aa)
Lyase Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TE33_AMYOR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH98793.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_1079_10
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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9679..11337
DNA (1659bp) protein (553aa)
thioredoxin reductase (EC:1.8.1.9)
chemotaxis protein CheY Tax=Streptomyces sp. BoleA5 RepID=UPI0003743C80
Chemotaxis protein CheY {ECO:0000313|EMBL:ETK31582.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
PLM1_60_b1_redo_sep16_scaffold_1079_11
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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11334..12764
DNA (1431bp) protein (477aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00037F9AA1
putative two-component system sensor kinase
PLM1_60_b1_redo_sep16_scaffold_1079_12
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(12761..13504)
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Amycolatopsis mediterranei RepID=G0G6D0_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK46534.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_60_b1_redo_sep16_scaffold_1079_13
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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13797..16208
DNA (2412bp) protein (804aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:ACZ87798.1}; EC=3.2.1.96 {ECO:0000313|EMBL:ACZ87798.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (EC:3.2.1.96)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B8I8_STRRD
PLM1_60_b1_redo_sep16_scaffold_1079_14
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(16221..20081)
DNA (3861bp) protein (1287aa)
hrpA; ATP-dependent helicase (EC:3.6.1.-)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003829330
RNA helicase {ECO:0000313|EMBL:EQD84413.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM1_60_b1_redo_sep16_scaffold_1079_15
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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20196..20576
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YWC5_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD57516.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
Displaying 15 items

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