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PLM1_60_b1_redo_sep16_scaffold_1087

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1087_1
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(8..520)
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X5C7_SALTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP54077.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_60_b1_redo_sep16_scaffold_1087_2
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(537..851)
DNA (315bp) protein (105aa)
DsrC family protein Tax=Salinispora arenicola (strain CNS-205) RepID=A8M7K7_SALAI
DsrC family protein
DsrC family protein {ECO:0000313|EMBL:ABW00374.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_60_b1_redo_sep16_scaffold_1087_3
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(858..2090)
DNA (1233bp) protein (411aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tax=Salinispora arenicola (strain CNS-205) RepID=A8M7K6_SALAI
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ABW00373.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_60_b1_redo_sep16_scaffold_1087_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(2172..2468)
DNA (297bp) protein (99aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_60_b1_redo_sep16_scaffold_1087_5
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2712..2981)
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FG67_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB43811.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_1087_6
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3169..4560
DNA (1392bp) protein (464aa)
beta-lactamase Tax=Streptomyces viridosporus RepID=UPI0002D2B341
Beta-lactamase {ECO:0000313|EMBL:KES04410.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
beta-lactamase domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_1087_7
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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4642..5241
DNA (600bp) protein (200aa)
sulfurtransferase Tax=Micromonospora sp. CNB394 RepID=UPI00037C0CA9
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
rhodanese domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_1087_8
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5238..6212
DNA (975bp) protein (325aa)
Putative permease Tax=Saccharomonospora marina XMU15 RepID=H5X0Q3_9PSEU
Putative permease {ECO:0000313|EMBL:EHR50849.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1087_9
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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6242..6937
DNA (696bp) protein (232aa)
thiopurine S-methyltransferase Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002483D48
tpm; thiopurine S-methyltransferase
Thiopurine S-methyltransferase, putative {ECO:0000313|EMBL:ABW27403.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
PLM1_60_b1_redo_sep16_scaffold_1087_10
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6994..7788
DNA (795bp) protein (265aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037BAA8F
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:CCK28681.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM1_60_b1_redo_sep16_scaffold_1087_11
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7993..8580
DNA (588bp) protein (196aa)
SAM-dependent methyltransferase Tax=Saccharopolyspora erythraea RepID=T2RNV1_SACER
methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:EQD81630.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM1_60_b1_redo_sep16_scaffold_1087_12
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8577..9245)
DNA (669bp) protein (223aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000370625B
UbiE/COQ5 methyltransferase family protein {ECO:0000313|EMBL:EUA14927.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1087_13
Mycobacterium africanum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9279..9923)
DNA (645bp) protein (215aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000376049D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC25404.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium africanum (strain GM041182).;"
PLM1_60_b1_redo_sep16_scaffold_1087_14
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10004..11161)
DNA (1158bp) protein (386aa)
iscS3; Cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase family protein Tax=Saccharomonospora azurea RepID=H8GBL6_9PSEU
Cysteine desulfurase family protein {ECO:0000313|EMBL:EHK88138.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea SZMC 14600.;"
PLM1_60_b1_redo_sep16_scaffold_1087_15
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11158..11832)
DNA (675bp) protein (225aa)
Sulfurtransferase Tax=Streptomyces viridochromogenes Tue57 RepID=L8PKJ8_STRVR
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
putative ArsR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1087_16
unknown

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11896..12054
DNA (159bp) protein (53aa)
beta-lactamase domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_1087_17
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12436..12690
DNA (255bp) protein (85aa)
Major facilitator superfamily MFS_1 Tax=Streptomyces davawensis JCM 4913 RepID=K4R5N9_9ACTO
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCK28673.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM1_60_b1_redo_sep16_scaffold_1087_18
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13028..13315
DNA (288bp) protein (96aa)
Transcriptional regulator, ArsR family Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S9T2_INTC7
ArsR transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADU47122.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM1_60_b1_redo_sep16_scaffold_1087_19
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13312..13794
DNA (483bp) protein (161aa)
Activator of Hsp90 ATPase 1 family protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WB12_9ACTO
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AGZ46182.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_1087_20
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13795..14235
DNA (441bp) protein (147aa)
hypothetical protein Tax=Rhodococcus sp. DK17 RepID=UPI0002F5A7E9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABH00864.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
PLM1_60_b1_redo_sep16_scaffold_1087_21
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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14405..15112
DNA (708bp) protein (236aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7TY39_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC41416.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM1_60_b1_redo_sep16_scaffold_1087_22
unknown

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15805..16323
DNA (519bp) protein (173aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1087_23
unknown

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16544..16741
DNA (198bp) protein (66aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1087_24
unknown

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16707..16820
DNA (114bp) protein (38aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1087_25
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(17023..17373)
DNA (351bp) protein (117aa)
Transcriptional regulator Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JUN0_SACES
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCH29621.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_60_b1_redo_sep16_scaffold_1087_26
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18047..18601
DNA (555bp) protein (185aa)
mini-circle protein Tax=Frankia sp. Iso899 RepID=UPI0003B4BB4D
Uncharacterized protein {ECO:0000313|EMBL:EGD45556.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1087_27
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18824..20530
DNA (1707bp) protein (569aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00035D6C64
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEB42084.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_1087_28
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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20527..20871
DNA (345bp) protein (115aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003779D3D
putative secreted subtilisin-like serine protease
Putative secreted subtilisin-like serine protease {ECO:0000313|EMBL:CCH29673.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Displaying 28 items

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