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PLM1_60_b1_redo_sep16_scaffold_1092

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1092_1
unknown

Not on your lists

comp(1..102)
DNA (102bp) protein (34aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1092_2
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(102..455)
DNA (354bp) protein (118aa)
Putative transcriptional regulator Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YXE6_NOCFA
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAD57145.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
PLM1_60_b1_redo_sep16_scaffold_1092_3
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

629..856
DNA (228bp) protein (76aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
Acylphosphatase Tax=Streptomyces albulus CCRC 11814 RepID=S0HPN9_STRA9
acylphosphatase
PLM1_60_b1_redo_sep16_scaffold_1092_4
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

949..2166
DNA (1218bp) protein (406aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003800B99
Uncharacterized protein {ECO:0000313|EMBL:AJR18821.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1092_5
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2402..2836
DNA (435bp) protein (145aa)
OsmC family protein Tax=Saccharopolyspora spinosa RepID=UPI0002379A60
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:CCH27596.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_60_b1_redo_sep16_scaffold_1092_6
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2846..3586)
DNA (741bp) protein (247aa)
serine/threonine phosphatase Tax=Streptomyces sp. FxanaC1 RepID=UPI00035F931C
serine/threonine protein phosphatase
Serine/threonine protein phosphatase {ECO:0000313|EMBL:AJF70285.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM1_60_b1_redo_sep16_scaffold_1092_7
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3750..4709)
DNA (960bp) protein (320aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000381D95E
ABC transporter permease {ECO:0000313|EMBL:EWT07930.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
peptide transport system permease protein
PLM1_60_b1_redo_sep16_scaffold_1092_8
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4727..5680)
DNA (954bp) protein (318aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000374DE81
ABC transporter permease {ECO:0000313|EMBL:EWT07931.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
appC; oligopeptide transport system permease AppC
PLM1_60_b1_redo_sep16_scaffold_1092_9
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5677..6741)
DNA (1065bp) protein (355aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI000373BDB2
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWT07932.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
putative peptide ABC transporter ATP-binding protein
PLM1_60_b1_redo_sep16_scaffold_1092_10
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6738..7805)
DNA (1068bp) protein (356aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00035D1DDC
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EWT07933.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
putative peptide ABC transporter ATP-binding protein
PLM1_60_b1_redo_sep16_scaffold_1092_11
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7825..9627)
DNA (1803bp) protein (601aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036DE18A
Uncharacterized protein {ECO:0000313|EMBL:EWT07934.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
extracellular solute-binding protein
PLM1_60_b1_redo_sep16_scaffold_1092_12
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9709..10278)
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WWP9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY53596.1}; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 10524.;"
isoprenylcysteine carboxyl methyltransferase
PLM1_60_b1_redo_sep16_scaffold_1092_13
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10366..11706)
DNA (1341bp) protein (447aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
Integral membrane sensor signal transduction histidine kinase Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SGA7_ACTS5
PLM1_60_b1_redo_sep16_scaffold_1092_14
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11726..12397
DNA (672bp) protein (224aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MZY8_9ACTO
response regulator mprA
Response regulator mprA {ECO:0000313|EMBL:AGZ43363.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_1092_15
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12433..13068)
DNA (636bp) protein (212aa)
LuxR family transcriptional regulator Tax=Salinispora pacifica RepID=UPI00037B7D25
LuxR family transcriptional regulator {ECO:0000313|EMBL:KHD77961.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
putative two-component system response regulator
PLM1_60_b1_redo_sep16_scaffold_1092_16
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13056..14339)
DNA (1284bp) protein (428aa)
Putative two-component system sensor kinase Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HG50_ACTM4
putative two-component system sensor kinase
Putative two-component system sensor kinase {ECO:0000313|EMBL:BAL91987.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_1092_17
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14728..16014
DNA (1287bp) protein (429aa)
Hydrolase of the alpha/beta superfamily Tax=Amycolatopsis azurea DSM 43854 RepID=M2NU03_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:KHD78058.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1092_18
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16023..16577)
DNA (555bp) protein (185aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003636A2E
PadR family transcriptional regulator {ECO:0000313|EMBL:KJR05615.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
Transcriptional regulator PadR-like family
PLM1_60_b1_redo_sep16_scaffold_1092_19
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16970..17368
DNA (399bp) protein (133aa)
hypothetical protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026271B2
Conserved putative membrane protein
Conserved putative membrane protein {ECO:0000313|EMBL:AIG79824.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
PLM1_60_b1_redo_sep16_scaffold_1092_20
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

17454..18827
DNA (1374bp) protein (458aa)
Coenzyme F390 synthetase-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARS1_RUBXD
coenzyme F390 synthetase-like protein
Coenzyme F390 synthetase-like protein {ECO:0000313|EMBL:ABG05907.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_60_b1_redo_sep16_scaffold_1092_21
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18846..19472)
DNA (627bp) protein (209aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI00037B388E
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADD43451.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_1092_22
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19587..20027
DNA (441bp) protein (147aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI000368ACDE
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI89457.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus J1074.;"
PLM1_60_b1_redo_sep16_scaffold_1092_23
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20072..20440
DNA (369bp) protein (123aa)
hypothetical protein Tax=Nocardiopsis ganjiahuensis RepID=UPI000347383F
Uncharacterized protein {ECO:0000313|EMBL:EMD26168.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Displaying 23 items

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