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PLM1_60_b1_redo_sep16_scaffold_1163

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1163_1
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..121
DNA (120bp) protein (40aa)
Uncharacterized protein Tax=Gordonia rhizosphera NBRC 16068 RepID=K6V0F6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAB89303.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1163_2
unknown

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comp(936..1385)
DNA (450bp) protein (150aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1163_3
unknown

Not on your lists

1596..1901
DNA (306bp) protein (102aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1163_4
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2502..3578
DNA (1077bp) protein (359aa)
hypothetical protein Tax=Longispora albida RepID=UPI00036699F6
Uncharacterized protein {ECO:0000313|EMBL:EPH45111.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
NHL repeat containing protein
PLM1_60_b1_redo_sep16_scaffold_1163_5
Streptomyces sp. W007, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3578..5104
DNA (1527bp) protein (509aa)
phoD; phosphodiesterase/alkaline phosphatase D (EC:3.1.4.1)
hypothetical protein Tax=Longispora albida RepID=UPI00037F7674
Phosphodiesterase {ECO:0000313|EMBL:EHM23731.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. W007.;"
PLM1_60_b1_redo_sep16_scaffold_1163_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5208..5585
DNA (378bp) protein (126aa)
hypothetical protein Tax=Longispora albida RepID=UPI000379A3BC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92777.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM1_60_b1_redo_sep16_scaffold_1163_7
unknown

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5777..6205
DNA (429bp) protein (143aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1163_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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6229..6438
DNA (210bp) protein (70aa)
Exonuclease Tax=Micromonospora lupini str. Lupac 08 RepID=I0LBQ4_9ACTO
Exonuclease {ECO:0000313|EMBL:CCH21251.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
Exonuclease
PLM1_60_b1_redo_sep16_scaffold_1163_9
unknown

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6557..6697
DNA (141bp) protein (47aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1163_10
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7066..7980)
DNA (915bp) protein (305aa)
hypothetical protein Tax=Streptomyces viridosporus RepID=UPI0001AF1466
Putative uncharacterized protein {ECO:0000313|EMBL:EFE69670.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1163_11
RLO_PLX_64_10, Bacteria

Not on your lists

8287..9270
DNA (984bp) protein (328aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PVT0_9ACTO
RNA polymerase factor sigma-70
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM1_60_b1_redo_sep16_scaffold_1163_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9522..10472
DNA (951bp) protein (317aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PND8_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV77235.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM1_60_b1_redo_sep16_scaffold_1163_13
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10616..11140)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Jannaschia sp. (strain CCS1) RepID=Q28P17_JANSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD55545.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (strain CCS1).;"
PLM1_60_b1_redo_sep16_scaffold_1163_14
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11226..12017
DNA (792bp) protein (264aa)
Transcriptional regulator, XRE family protein Tax=Marinobacter algicola DG893 RepID=A6EVA8_9ALTE
XRE family transcriptional regulator {ECO:0000313|EMBL:GAM44967.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
putative transcriptional regulatory protein, XRE family
PLM1_60_b1_redo_sep16_scaffold_1163_15
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12038..12214)
DNA (177bp) protein (59aa)
hypothetical protein Tax=Nocardiopsis chromatogenes RepID=UPI00034B56B9
Oxidoreductase {ECO:0000313|EMBL:EFL08303.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
nitroreductase
PLM1_60_b1_redo_sep16_scaffold_1163_16
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12389..12778)
DNA (390bp) protein (130aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI00035EF7C3
Uncharacterized protein {ECO:0000313|EMBL:GAM44651.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1163_17
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12809..13045)
DNA (237bp) protein (79aa)
Putative uncharacterized protein Tax=Frankia sp. (strain EAN1pec) RepID=A8LHI0_FRASN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW15799.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_60_b1_redo_sep16_scaffold_1163_18
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13042..13569)
DNA (528bp) protein (176aa)
Erythromycin esterase Tax=Rhodococcus sp. EsD8 RepID=N1M9I8_9NOCA
Erythromycin esterase {ECO:0000313|EMBL:KDE14689.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1163_19
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13692..14459
DNA (768bp) protein (256aa)
Transcriptional regulator, MerR family Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P3U8_STRVO
MerR family transcriptional regulator {ECO:0000313|EMBL:ETK31704.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
MerR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1163_20
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14621..15130
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L093_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH17240.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1163_21
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15288..15764)
DNA (477bp) protein (159aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN37760.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
PLM1_60_b1_redo_sep16_scaffold_1163_22
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15856..16245
DNA (390bp) protein (130aa)
Putative MerR family transcriptional regulator Tax=Rhodococcus opacus (strain B4) RepID=C1AS12_RHOOB
MerR family transcriptional regulator {ECO:0000313|EMBL:KJV27598.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
MerR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1163_23
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16646..16930)
DNA (285bp) protein (95aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003783395
Putative esterase PIR7A {ECO:0000313|EMBL:EPH46698.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
alpha/beta hydrolase fold protein
PLM1_60_b1_redo_sep16_scaffold_1163_24
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17623..19320
DNA (1698bp) protein (566aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W9R6_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ44656.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_1163_25
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(19772..20227)
DNA (456bp) protein (152aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Alkylhydroperoxidase like protein, AhpD family Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQJ9_9CHLR
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1163_26
unknown

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20311..20538
DNA (228bp) protein (76aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1163_27
unknown

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20652..21497
DNA (846bp) protein (282aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1163_28
unknown

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comp(21828..22100)
DNA (273bp) protein (91aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1163_29
unknown

Not on your lists

comp(22210..22488)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1163_30
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22663..22821)
DNA (159bp) protein (53aa)
epoxide hydrolase Tax=Streptomyces canus RepID=UPI00036C9ECB
Uncharacterized protein {ECO:0000313|EMBL:EPD61578.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
epoxide hydrolase
Displaying 30 items

View Taxonomy