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PLM1_60_b1_redo_sep16_scaffold_1228

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1228_1
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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1318..2382
DNA (1065bp) protein (355aa)
PTS system mannitol-specific transporter subunit IIC Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VT94_9ACTO
PTS system mannitol-specific transporter subunit IIC
PTS system mannitol-specific transporter subunit IIC {ECO:0000313|EMBL:AGZ38881.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_1228_2
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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2379..2699
DNA (321bp) protein (107aa)
PTS lactose transporter subunit IIB Tax=Salinispora arenicola RepID=UPI0003689878
PTS lactose transporter subunit IIB {ECO:0000313|EMBL:ETK36209.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
phosphotransferase system lactose/cellobiose-specific IIB subunit
PLM1_60_b1_redo_sep16_scaffold_1228_3
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2838..3602
DNA (765bp) protein (255aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VPI8_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ38883.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_1228_4
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3599..4090
DNA (492bp) protein (164aa)
PTS sugar transporter subunit IIA Tax=Salinispora arenicola RepID=UPI00036546C0
phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 {ECO:0000313|EMBL:ABW00598.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_60_b1_redo_sep16_scaffold_1228_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4246..4914)
DNA (669bp) protein (223aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00036BD39B
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:EXG81795.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Haloacid dehalogenase domain-containing protein hydrolase
PLM1_60_b1_redo_sep16_scaffold_1228_6
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(5061..5921)
DNA (861bp) protein (287aa)
Putative CDP-alcohol phosphatidyltransferase Tax=Micromonospora lupini str. Lupac 08 RepID=I0L5T5_9ACTO
Putative CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:CCH19182.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
CDP-alcohol phosphatidyltransferase
PLM1_60_b1_redo_sep16_scaffold_1228_7
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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5999..6967
DNA (969bp) protein (323aa)
Putative zinc-binding dehydrogenase Tax=Micromonospora lupini str. Lupac 08 RepID=I0L5T4_9ACTO
Putative zinc-binding dehydrogenase {ECO:0000313|EMBL:CCH19181.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
FAD dependent oxidoreductase
PLM1_60_b1_redo_sep16_scaffold_1228_8
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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6972..7370
DNA (399bp) protein (133aa)
6-pyruvoyl tetrahydropterin synthase Tax=Sciscionella marina RepID=UPI0003666E61
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66423.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1228_9
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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7526..8587
DNA (1062bp) protein (354aa)
glycosyl transferase Tax=Salinispora RepID=UPI000370FDD9
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66997.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
group 1 glycosyl transferase
PLM1_60_b1_redo_sep16_scaffold_1228_10
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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8584..9396
DNA (813bp) protein (271aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FHG2_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB45134.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_1228_11
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9455..10459
DNA (1005bp) protein (335aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L5T0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH19177.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1228_12
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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10509..11171
DNA (663bp) protein (221aa)
GTP cyclohydrolase-2 {ECO:0000256|HAMAP-Rule:MF_00179}; EC=3.5.4.25 {ECO:0000256|HAMAP-Rule:MF_00179};; GTP cyclohydrolase II {ECO:0000256|HAMAP-Rule:MF_00179}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
ribA; GTP cyclohydrolase II (EC:3.5.4.25)
GTP cyclohydrolase-2 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L5S9_9ACTO
PLM1_60_b1_redo_sep16_scaffold_1228_13
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11308..13110
DNA (1803bp) protein (601aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MAA8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH19183.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
sulfatase
PLM1_60_b1_redo_sep16_scaffold_1228_14
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13159..13629)
DNA (471bp) protein (157aa)
dCMP deaminase Tax=Frankia sp. BMG5.12 RepID=UPI000364CB5C
CMP/dCMP deaminase zinc-binding {ECO:0000313|EMBL:EFC81632.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
zinc-binding CMP/dCMP deaminase
PLM1_60_b1_redo_sep16_scaffold_1228_15
Streptomyces leeuwenhoekii, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13626..14303)
DNA (678bp) protein (226aa)
5-amino-6-(5-phosphoribosylamino)uracil reductase {ECO:0000313|EMBL:CQR59408.1}; EC=1.1.1.193 {ECO:0000313|EMBL:CQR59408.1};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces leeuwenhoekii.;"
Putative riboflavin-specific deaminase/reductase Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82YE5_STRAW
putative riboflavin-specific deaminase/reductase
PLM1_60_b1_redo_sep16_scaffold_1228_16
unknown

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14488..14910
DNA (423bp) protein (141aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1228_17
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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15048..16364
DNA (1317bp) protein (439aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BIE0_MYCCN
carbohydrate ABC transporter substrate-binding protein, CUT1 family
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:AFM17047.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM1_60_b1_redo_sep16_scaffold_1228_18
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16361..17338
DNA (978bp) protein (326aa)
ABC transporter permease Tax=Actinoplanes globisporus RepID=UPI00037E6B6B
ABC transporter permease {ECO:0000313|EMBL:KHD75398.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
carbohydrate ABC transporter membrane protein 1
PLM1_60_b1_redo_sep16_scaffold_1228_19
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17335..18159
DNA (825bp) protein (275aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family Tax=Mycobacterium gilvum RepID=A4TCZ4_MYCGI
Sugar ABC transporter permease {ECO:0000313|EMBL:KHD75329.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
binding-protein-dependent transport systems inner membrane component
PLM1_60_b1_redo_sep16_scaffold_1228_20
Mycobacterium rufum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18175..19359
DNA (1185bp) protein (395aa)
ugpC; putative multiple sugar-binding transport ATP-binding protein (EC:3.6.3.20)
ABC transporter--like protein Tax=Mycobacterium vaccae ATCC 25954 RepID=K0V146_MYCVA
ABC transporter {ECO:0000313|EMBL:KGI67958.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;"
PLM1_60_b1_redo_sep16_scaffold_1228_21
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(19376..20701)
DNA (1326bp) protein (442aa)
Uncharacterized protein Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RTT5_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG03145.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM1_60_b1_redo_sep16_scaffold_1228_22
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21112..21474
DNA (363bp) protein (121aa)
hypothetical protein Tax=Rhodococcus opacus RepID=UPI00029CD42C
Uncharacterized protein {ECO:0000313|EMBL:GAF43253.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1228_23
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21625..22170
DNA (546bp) protein (182aa)
Decarboxylase protein Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CDY3_STRBB
decarboxylase
Decarboxylase protein {ECO:0000313|EMBL:ADI04648.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
Displaying 23 items

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